Gene Ndas_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3201 
Symbol 
ID9247058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp3829056 
End bp3830342 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003681115 
Protein GI297562141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAG CACCCAAAGT GGCCCCCGGG GAATGTTCCC CGGCCGTGGC CGCGCTGGCC 
GGTGCGCGCG AGATCATCCA CCAAGCGTTG AACGCCGAAG TCCCGCCCGG GGCCGACGAG 
ACCGCCGCGG AGGAGATCGC GGCGCTGTGG GCGCAGCTGG ACCAGATCCG GTATCAGGCG 
TTGACGCAGA TGGCGCGCCT GTACGCGCGC GGTGAGGTCG CCCGCTACAG CGGCTACTCC 
ACGCTGGACA AGTGGTTGGT GCACCACGGC ACGATGCCCA CCGCTCAGGC CAAGGACCTG 
GCTCGTCTGG CCCAGCACGT GCACGAGGAG ACACTGCCCG CCACTGCCCA AGCAGTAGCT 
GAGGGCAGGG TGGTGTTGGG TGAGGCGGTC GCGATCGCCA AAGCCACCGA CAAAGCCGTC 
CAGACCCGCG ACGCCCAGCA TTTCCCCGAT CAGGGGGAGT ACCGGCACGG GTTTGAGTCC 
GCCCTGGTGG CCGCGAAGGC GGAGCGGCCC GCGTTGTCGG TCAACCAGCT CCAGTCGGTG 
GCCCGCCAGG TCGCCTACCG TTTGGACCCC CACCGCCTGG ACCGCGACCA CGAGACCGCC 
CATGCCGCCC GCGGACTGAC GGTGCATGAC ACGTTCCAGG GCAGCTACCA ACTCCAGGCC 
TGGGGCGGCA GTGGGGATGC GTTGGTCGTG CGCGCGGCCA TCGACACCTT CACCACCCCA 
CCCGGGGAAG GTGACACCCG GTCCCGGTCC CAGCGTGAGC ACGACGCGCT CATCGCGGCG 
CTGCGTTTTG CCACCACCCA CACCGGATGC GGCAACGCTC CGGCTCCGTT GGCGCAGATC 
CGCATCGTGG TGCCCGTGCA GACCTACCTG GACGCCCAAG GCCAGGAGGT TCCGGCGTTG 
GACGAGCACG GTCGAGTGAT TCCGGTCGGG CTGGTGCACG AGTTGGCCGC CGATTCTGAG 
GTGGTGCGGA TGCTCACCGC ACCGCCCACC GGGCAGGTGT TGGATGTGGG CCACAGCCGC 
CGCCTGGCCT CAACCCGCCA ACGCACCGCC GCCTTCCACG GACACGCCAC CTGCGCGCAC 
CCGGGCGGAT GTGAGGTACC GGTGGCGTTG TGCCAGGCCG ACCACGTCAC CTCGTTCTCC 
CGAGGAGGGC GCACCGTGGT CGCCAATCTC CAACCGTTGT GCGGGCCGCA CAACCGGGCC 
AAGTACCAAC GCGAACTGCG CACACACCGA CAGCGGGAAC GGCATCATCC GCCCGACAGG 
ATTCCGGTTC CACCGCCCCG GGAATGA
 
Protein sequence
MIAAPKVAPG ECSPAVAALA GAREIIHQAL NAEVPPGADE TAAEEIAALW AQLDQIRYQA 
LTQMARLYAR GEVARYSGYS TLDKWLVHHG TMPTAQAKDL ARLAQHVHEE TLPATAQAVA 
EGRVVLGEAV AIAKATDKAV QTRDAQHFPD QGEYRHGFES ALVAAKAERP ALSVNQLQSV 
ARQVAYRLDP HRLDRDHETA HAARGLTVHD TFQGSYQLQA WGGSGDALVV RAAIDTFTTP 
PGEGDTRSRS QREHDALIAA LRFATTHTGC GNAPAPLAQI RIVVPVQTYL DAQGQEVPAL 
DEHGRVIPVG LVHELAADSE VVRMLTAPPT GQVLDVGHSR RLASTRQRTA AFHGHATCAH 
PGGCEVPVAL CQADHVTSFS RGGRTVVANL QPLCGPHNRA KYQRELRTHR QRERHHPPDR 
IPVPPPRE