Gene Ndas_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3114 
Symbol 
ID9246970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3729238 
End bp3729918 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content75% 
IMG OID 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_003681029 
Protein GI297562055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.33559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGTG TGAGGACCAG CCACGGAACC AGCCTGCGCA AGCGCCTGGA CGCATCGCTT 
CTGTACCTGT GCACCGACGC CCGGACCGGT CGGGGCGACC TGGCCGAGTT CGCCGACGCG
GCCCTGGCCG GGGGAGTGGA CATCATCCAG CTCCGGGACA AGGGCCTGGA GGCACGCGAG
GAGATCGCGG CCCTGGAGGT GATGAAGGAG GCGTGCGAGC GGTACGGCGC CCTGCTCGCG
GTCAACGACC GCGCCGACAT CGCCCGCGCC GTGCGCGCCG ACGTCCTCCA CCTGGGTCAG
CGGGACCTGC CCGTGCCCAT GGCCCGCGAC ATCATCGGCG CCGACCCCGT GATCGGCCGC
TCCAACAACG ACGTCGCCGC CGCGGCCGCC TCCGCCGAGG AGCCGGGCAG CGACTACTTC
TGCGTCGGAC CGACCTGGGC GACGCCCACC AAGCCGGGCC GCCCGGCCGC CGGGCTGGAG
CTGGTGGAGG AGGCGGCCGC GCTGGGCACC GACCGCCCCT GGTTCGCCAT CGGCGGGATC
GACGTCGACA ACATCGACCG CGTGCTGGAC GCCGGGGCCC GCCGGGTCGT GGTCGTGCGC
GCGATCACGG AAGCGGAGGA CCCCCGGGCC GCCGCCGCCG CTCTGCGCCA GCGCCTGGCG
GCCCGCGCCG CCCGGCCCTA G
 
Protein sequence
MDRVRTSHGT SLRKRLDASL LYLCTDARTG RGDLAEFADA ALAGGVDIIQ LRDKGLEARE 
EIAALEVMKE ACERYGALLA VNDRADIARA VRADVLHLGQ RDLPVPMARD IIGADPVIGR
SNNDVAAAAA SAEEPGSDYF CVGPTWATPT KPGRPAAGLE LVEEAAALGT DRPWFAIGGI
DVDNIDRVLD AGARRVVVVR AITEAEDPRA AAAALRQRLA ARAARP