Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3068 |
Symbol | |
ID | 9246924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3667891 |
End bp | 3668742 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_003680983 |
Protein GI | 297562009 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.914691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCC ACGAGTTCAC GAGCATCCGC TCACCCAGGA TCAAGGGGGT TCGGCGGCTC GCCAAGCGCA CCTTCCGCCA ACGCGAGCGG CGCTTCCTCG CCGAGGGCCC GCAGGCTGTG CGCGAGGCCC TGGCCGCGGC GGTCGACGGT GCCCAGGGGC GGTCCCCCCA CGGAGGGGCC GCCTCCGGCG TGGTCGAGGT CTACGCCACC GCGGAGGCGA TGCAGCGCCA CATCGACCTG GTGGACGCCG CCCGCGCGGT GGACGTGCCC ACCCACAGGG TCAGTCTGGA CGTGATGTCG GAACTGGCCC AGACGGTCAC CCCGCAGGGG GTCATCGCCG TCTGCGAGTT CGTCGACGTC CCCCTGGAGC GGGTCGGCGA CGTCCGCCTC GCGGCCGTGC TCTCCCACGT CCGCGATCCG GGCAACGCGG GCACGGTGCT GCGCACCGCC GACGCGGCCG GGGCCGACGT CGTCATCTTC ACCGACGCCT CCGTCGACCC CTACAACGGC AAGTGCGTGC GGGCCTCCGC CGGAAGCCTG TTCCACCTGC CCGTGGTCGT GGGCGTCCCC GTGGCGCGCG CCGTCGACTT CCTGCGCGGC GTGGGCGCGC GGGTGTGGGC CGCGGACGGC AGCGGCCAGC GCGACCTGCA CGCCGTCGCC GACAGCGGCG ACCTGGACGG CCCGGTCGGC TGGGTGTTCG GCAACGAGGC CTGGGGACTG CCCGAGGAGA CCGTCGCCCT GACCGACGGC GCGGTCAGCG TCCCGATCTA CGGCGGGGCC GAAAGCCTGA ATCTGGCCAC CGCGGCCGCG GTCTGCCTCT ACACCACCGC GCGGCAGCAG CGGCGTTCCT GA
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Protein sequence | MASHEFTSIR SPRIKGVRRL AKRTFRQRER RFLAEGPQAV REALAAAVDG AQGRSPHGGA ASGVVEVYAT AEAMQRHIDL VDAARAVDVP THRVSLDVMS ELAQTVTPQG VIAVCEFVDV PLERVGDVRL AAVLSHVRDP GNAGTVLRTA DAAGADVVIF TDASVDPYNG KCVRASAGSL FHLPVVVGVP VARAVDFLRG VGARVWAADG SGQRDLHAVA DSGDLDGPVG WVFGNEAWGL PEETVALTDG AVSVPIYGGA ESLNLATAAA VCLYTTARQQ RRS
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