Gene Ndas_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2881 
Symbol 
ID9246732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3439321 
End bp3441897 
Gene Length2577 bp 
Protein Length858 aa 
Translation table11 
GC content72% 
IMG OID 
ProducttRNA synthetase valyl/leucyl anticodon-binding protein 
Protein accessionYP_003680798 
Protein GI297561824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG GCTCTCATTC CTTCCGCATG CCCGACAAGC CCTCGCTGGA CGGTATCGAG 
GCGAAGTGGG TCGACGTATG GGATGAGTCC GGCGTCTACC ACTTCGACCG CACGGCCGAG
CGCGCGGACG TCTACTCCAT CGACACCCCG CCGCCCACGG TGTCCGGGTC GCTGCACATC
GGCCACGTGT TCTCCTACAC GCACACCGAC ACCGTCGCGC GCTTCCAGCG CATGAACGGC
AAGGCCGTCT TCTACCCCAT GGGCTGGGAC GACAACGGCC TGCCCACCGA GCGGCGCGTC
CAGAACTACT ACGGCGTGCG CTGCGACCCG TCGATCCCCT ACGACCCGGA CTTCCAGCCG
CCCGCCAAGC CCGACCCCAA GCGGCAGGTC CCCGTCTCCC GGCGCAACTT CATCGAGCTG
TGCGACCGGC TCACCGCCGA GGACGAGAAG GTCTTCGAGT CCATCTGGCG CCGCCTCGGG
CTGAGCGTCG ACTGGCGCCA CACCTACGCC ACCATCGACG ACAACTCCCG CGCCGCCGCC
CAGCGCGCCT TCCTGCGCAA CCTGGCCCGC GGCGAGGCCT ACATGTCCGA GGCGCCCACC
CTGTGGGACG TCACGTTCCG CACCGCGGTC GCCCAGGCCG AGCTGGAGGA CCGCGAACGC
CCCAGCGCCT ACCACAAGGT CGCCTTCCAC AAGCCCGACG GCACCCCGGT CCACATCGAG
ACCACCCGCC CCGAGCTGCT GGCCGCCTGC GTCGCCCTGG TCGCCCACCC CGACGACGAG
CGCTACCAGG ACCTGTTCGG CACCACCGTG CGCACCCCCG TCTTCGGCGT CGAGGTCCCG
GTGCGGGCCC ACCGCCTCGC CGACCCCGAG AAGGGGTCCG GCATCGCCAT GATCTGCACC
TTCGGCGACA CCACCGACGT CACCTGGTGG CGCGAGCTCC AGCTGGAGAC CCGGCCCGTC
ATCGGCTGGG ACGGCCGCAT CATGGCCGAC CCGCCCAAGG GCCTGGAGAG CGGAGCCGCC
CGCGAGGCCT ACGACACGCT CGTGGGCGCC ACCGTCCACA CCGCGCGCGA GCGCACCGTC
GCCCTGCTGC GCGAGAGCGG CGACCTCGTC GGCGAGCCGA CGCCCATCAC CCACCCGGTG
AAGTTCTACG AGAAGGGCGA CAAGCCCCTG GAGATCGTCA CCACCCGCCA GTGGTACATC
CGCAACGGCG GTCGGGACGA GGACCTGCGC CAGCAGCTCC TGCGGCGCGG GCGCGAGCTC
ACCTGGTACC CCGAGCACAT GCGCGCCCGC TACGAGAACT GGGTCGAGGG CCTCAACGGC
GACTGGCTGA TCAGCCGCCA GCGCTTCTTC GGCGTGCCCT TCCCGGTCTG GTATCCGCTG
GACGCCGACG GCAACCCGCG CTACGACGAG CCCATCGTCC CCGCCGAGGA CCAGCTGCCC
GTCGACCCCA GCTCGCAGGC GCCCGAGGGC TACACCGAGG ACCAGCGCGG GCAGGCGGGC
GGCTTCATGG GCGACCCCGA CGTCATGGAC ACCTGGGCGA CCTCCTCGCT GTCCCCGCAG
ATCGCCTCCG GCTGGGAGCG CGACCCGGAC CTGTACCGGC GCGTCTTCCC CATGGACTAC
CGGCCCCAGG GCCAGGACAT CATCCGCACC TGGCTCTTCT CCACCGTGGT CCGGGCCCAC
TTCGAGAACG GCACCCTGCC CTGGAGCACC ACCGGCATCT CCGGCTGGAT CCTGGACCCC
GACCGCAAGA AGATGTCCAA GTCCAAGGGC AACGTCGTCA CCCCGCTGGC GCTGCTGGAG
AAGTACAGCT CCGACGCGGT CCGGTACTGG GCGGCCAGCG GTCGCCTGGG CACCGACACC
GCCATGGACG AGGGCCAGAT GAAGGTCGGC CGCAGGCTGT CCATCAAGAT CCTCAACGCC
AGCAAGTTCG TCATGTCCGT GGCCGGTGAG GACGCCGTCG CCGACCCCGC GCGGGTGACG
CAGCCGCTGG ACCGGGCGAT GCTGGCCGCG CTGGCCGACG TCGTGGAGGA CGCCACCTCC
GCCTTCCGCG CCTACGACCA CACCCGGGCC CTGGAGCGCA CCGAGCGCTT CTTCTGGGAC
TTCTGCGACG ACTACCTGGA GCTGGTCAAG GCCCGCGCCT ACGACACCGA GTCGGCCGAG
GGCGCCTCCG CCCGCGCCGC GCTGCTGGTC GCCCTGGGCG CCCTGCACAG GCTCTTCGCC
CCCTTCGTGC CCTTCGTGGC CGAGGAGGTC TGGAGCTGGT GGCAGGAGGG CTCGGTCCAC
GCCCAGCGCT GGCCCGACAC CGCCGAGTAC CGCGCCGCGG CGGCCGACGG CGACCCCGCC
GTCCTGGCCG CCACCGCCGA GGTGCTGCGC GCCGTGCGCA AGGCCAAGTC CGAGGCCAAG
CTGTCCATGC GGGCCGAGGT CGAGCACGTC AGCGTCTCGG GCAAGCGGGT CGACGCCGCG
CGCGCCGCCA GCGCCGACAT CGCCGCCGCG GGCCGCGCCT CCGGGATCGA CTTCCGCGCC
ACCGACGACG CCGAGCTCAC CGTCGAGGTG ACCCTGCCCG AGGCCCCCGC CGAGTAG
 
Protein sequence
MTNGSHSFRM PDKPSLDGIE AKWVDVWDES GVYHFDRTAE RADVYSIDTP PPTVSGSLHI 
GHVFSYTHTD TVARFQRMNG KAVFYPMGWD DNGLPTERRV QNYYGVRCDP SIPYDPDFQP
PAKPDPKRQV PVSRRNFIEL CDRLTAEDEK VFESIWRRLG LSVDWRHTYA TIDDNSRAAA
QRAFLRNLAR GEAYMSEAPT LWDVTFRTAV AQAELEDRER PSAYHKVAFH KPDGTPVHIE
TTRPELLAAC VALVAHPDDE RYQDLFGTTV RTPVFGVEVP VRAHRLADPE KGSGIAMICT
FGDTTDVTWW RELQLETRPV IGWDGRIMAD PPKGLESGAA REAYDTLVGA TVHTARERTV
ALLRESGDLV GEPTPITHPV KFYEKGDKPL EIVTTRQWYI RNGGRDEDLR QQLLRRGREL
TWYPEHMRAR YENWVEGLNG DWLISRQRFF GVPFPVWYPL DADGNPRYDE PIVPAEDQLP
VDPSSQAPEG YTEDQRGQAG GFMGDPDVMD TWATSSLSPQ IASGWERDPD LYRRVFPMDY
RPQGQDIIRT WLFSTVVRAH FENGTLPWST TGISGWILDP DRKKMSKSKG NVVTPLALLE
KYSSDAVRYW AASGRLGTDT AMDEGQMKVG RRLSIKILNA SKFVMSVAGE DAVADPARVT
QPLDRAMLAA LADVVEDATS AFRAYDHTRA LERTERFFWD FCDDYLELVK ARAYDTESAE
GASARAALLV ALGALHRLFA PFVPFVAEEV WSWWQEGSVH AQRWPDTAEY RAAAADGDPA
VLAATAEVLR AVRKAKSEAK LSMRAEVEHV SVSGKRVDAA RAASADIAAA GRASGIDFRA
TDDAELTVEV TLPEAPAE