Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2793 |
Symbol | |
ID | 9246644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3334897 |
End bp | 3335553 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | SNARE associated Golgi protein-related protein |
Protein accession | YP_003680711 |
Protein GI | 297561737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.404315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0961042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGAGG ACACGCGCGG CGTGCGAGCC GCGGACGTGT CGCGGCTCGC CCTGCTGCTG CTCTGGGTGG CGCTGCTGGT GTCGGCGCTG TTGTGGGGCC CCGACCTGGA GACCCTCCAG GCCTGGGTGG AGGACGCCGG AGCGGCCGCT CCGCTGGCCT ACCTGAGCGT GTACCTGCTG GGAGTGTTCG CCTTCCTGCC CAGGCCCGCC CTCAACGCCG CCGCAGGGCT GCTCTTCGGA ATGTCCCTGG GCCTGGTCCT GGCCGTGGCG GGCGGGGTGT GCGCCGCCCT GGCCCAGTTC TGGGTCGCCC GCCACGTGGC GGGCGACGCG GTGGCCCGGC GGCTGCCCGA GGGGGCCCGC ACCCGGTTGG AGACCCTGGC GGGCGGACGC GCCCTCATGG CGGTGCTCCA GCTGCGCCTG GTTCCGGTCA TCCCCTACCA GGTGGTCAAC TACGGCTTCG GACTGACCCG GATGCGGATG TGGCCCTTCG TGCTGGGCAC GCTCCTGGGC GGGGTGCCCA GCACGGCGGC GCTGGTGCTG GTCGGCGTCG GCGGCACGGA CCTGGGCCTG CCGGTGGCCG TGGGCGGGGC GGTGCTCGCG GTGGCGATCG GCGCGGTCTG GTGGGCGCGC TCGCGCCGTC GGCGGACGCG GTCCTGA
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Protein sequence | MGEDTRGVRA ADVSRLALLL LWVALLVSAL LWGPDLETLQ AWVEDAGAAA PLAYLSVYLL GVFAFLPRPA LNAAAGLLFG MSLGLVLAVA GGVCAALAQF WVARHVAGDA VARRLPEGAR TRLETLAGGR ALMAVLQLRL VPVIPYQVVN YGFGLTRMRM WPFVLGTLLG GVPSTAALVL VGVGGTDLGL PVAVGGAVLA VAIGAVWWAR SRRRRTRS
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