Gene Ndas_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2789 
Symbol 
ID9246640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3330778 
End bp3331935 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content73% 
IMG OID 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003680708 
Protein GI297561734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.183499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCG CACGTACTCT GCACACCCCC GAGGCGGAGC AACTCCTGGA ACTGACCCGG 
GAGATCGTGG ACAAGGAGCT GACCCCGCGG GCCGCCGGGG ACGAGGAGGG CGGCCTGTTC
CCGCGCGAGG TCTTCCGCGT GCTCGGCGGC GCCGGGCTGC TCGGCCTGCC CTACCCCGGC
CGGTACGGCG GCGGGGACCA GCCCTACGAG GTCTACCTCC AGGTGGTGGA GGAGCTGGCA
CGGGGCTGGC TCGCGGTCGG CCTGGGCGTG AGCGTCCACA CCCTGTCCTG CTACCCCCTC
GCCACCTTCG GCTCCGACGC GCAGAGGGAG GCCCACCTGC CCGGCATGCT CGGCGGCGGA
CTCCTGGGCG CCTACTGCCT GTCCGAGGCC GCCTCGGGCT CGGACGCCTC CGCCCTGACC
ACCCGGGCCG AGGCCGACGG GGACGGCTAC CGCGTCAACG GCGCCAAGGC CTGGATCACC
CACGGCGGCC AGGCCGACTA CTACACGCTC TTCGCCCGCA CCGGCGCCCC GGACTCCGGC
GCCCGCGGCA TCAGCTGCTT CCACGTCCCC GCGGACACCC CCGGCCTGGG ATCGGCGGCC
CCCGAGCGCA AGATGGGCAT GAACTCCTCG ATCACCGCCG GGGTCCTCCT CGACGACGTC
CGCCTCGGCG CCGACGCCCT GGTGGGCGAG CGGGACAGGG GCTTCGGCAT AGCCCTGTCC
GCCCTGGACT CCGGACGCCT GGGCATCGCC GCCTGCGCGG TCGGCCTCGC CCAGGCCGCC
CTCGACGCCG CCGTGGACTA CTCCCGCGAA CGCCACCAGT TCGGCACCGC CATCGGCGAC
TTCCAGGGCG TGGGCTTCAT GCTCGCCGAC ATGGCCACCC AGGTCGCGGC CTCCCGCGAG
CTCTACCTGT CGGCCGCGCG CCTGCGCGAC GCCGGGCTCC CCTTCGGCAA GCAGGCCGCG
ATGGCCAAGC TCCTGGCCAC CGACACCGCC ATGAGGGTCA CCACCGACGC CGTGCAGGTC
TTCGGCGGCT ACGGCTACAC CCGCGACTTC CCCGTCGAGC GCTACATGCG CGAGGCCAAG
GTGCTCCAGA TCGTGGAGGG CACCAACCAG GTGCAGCGCA TGGTCATCAG CCGCCACCTG
GCCAGGGAGG GAGCCTGA
 
Protein sequence
MTVARTLHTP EAEQLLELTR EIVDKELTPR AAGDEEGGLF PREVFRVLGG AGLLGLPYPG 
RYGGGDQPYE VYLQVVEELA RGWLAVGLGV SVHTLSCYPL ATFGSDAQRE AHLPGMLGGG
LLGAYCLSEA ASGSDASALT TRAEADGDGY RVNGAKAWIT HGGQADYYTL FARTGAPDSG
ARGISCFHVP ADTPGLGSAA PERKMGMNSS ITAGVLLDDV RLGADALVGE RDRGFGIALS
ALDSGRLGIA ACAVGLAQAA LDAAVDYSRE RHQFGTAIGD FQGVGFMLAD MATQVAASRE
LYLSAARLRD AGLPFGKQAA MAKLLATDTA MRVTTDAVQV FGGYGYTRDF PVERYMREAK
VLQIVEGTNQ VQRMVISRHL AREGA