Gene Ndas_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2710 
Symbol 
ID9246561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp3231623 
End bp3232624 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content69% 
IMG OID 
ProductEndo-1,4-beta-xylanase 
Protein accessionYP_003680630 
Protein GI297561656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.345913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATC CCCCCGCACC CCCGCGCAGC CGCGGACAAG GCCGCGCCAG AACGCTCGTC 
GGCCGGGTCT GCGCCGTCGC GGTCGCGCTG GTCACGACCC TGGCGCTGCT GCCCGGCACC 
GCCAGCGCGG CCATCACCAC CAACCAGACC GGCACCCACA ACGGCTACTT CTACTCCTTC 
TGGACCGACA GCCAGGGGAC CGTCTCCATG GAGCTGGGCT CCGGCGGCAA CTACACCACC 
TCATGGCGCA ACACCGGCAA CTTCGTCGCC GGCAAGGGCT GGCCCACCGG CGGGCGCAGG 
GCGGTGACCT ACTCGGGCAG CTTCAACCCG TCCGGAAACG CCTACCTGAC GCTCTACGGG 
TGGACGAGGA GCCCGCTCGT GGAGTACTAC ATCGTCGACA ACTGGGGCAC CTACCGGCCC 
ACCGGAACGC ACATGGGCAC GGTCACCAGC GACGGCGGCA CCTACGACAT CTACCGGACG 
ATGCGCTACG ACGCCCCCTC CATCGACGGC ATCCAGACCT TCCCCCAGTA CTGGAGCGTG 
CGTCAGTCCA GGCGCACGGG CGGAACCATC ACCTCCGGAA ACCACTTCGA CGCGTGGGCC 
CGGGCCGGAA TGAACCTGGG CAACCACGAC TACATGATCA TGGCCACGGA GGGCTACCAG 
AGCAGCGGGA GCTCCAACAT CACCGTGGGC TCCAGCGGCG GCGGCAACCC CGGCAACCCC 
GGCAACCCCG GTGGCGGCGG CTGCACCGCG ACCCTGTCCG CGGGCCAGCA GTGGAGCGAC 
CGGTACAACC TCAACGTCTC GGTCAGCGGT TCGAACGACT GGACCGTGAC GATGAACGTG 
CCGTCCCCGG CCAGGATCAG CGCCACGTGG AACGTCGGCG CCGACTACCC CAGCTCCCAG 
GTGCTGACCG CCAGGCCCAA CGGCAACGGC AACAACTGGG GCGTGACGAT CGACCACAAC 
GGCAACTGGA CCTGGCCGAC GGTCTCCTGC AGCGCGAACT GA
 
Protein sequence
MNHPPAPPRS RGQGRARTLV GRVCAVAVAL VTTLALLPGT ASAAITTNQT GTHNGYFYSF 
WTDSQGTVSM ELGSGGNYTT SWRNTGNFVA GKGWPTGGRR AVTYSGSFNP SGNAYLTLYG 
WTRSPLVEYY IVDNWGTYRP TGTHMGTVTS DGGTYDIYRT MRYDAPSIDG IQTFPQYWSV 
RQSRRTGGTI TSGNHFDAWA RAGMNLGNHD YMIMATEGYQ SSGSSNITVG SSGGGNPGNP 
GNPGGGGCTA TLSAGQQWSD RYNLNVSVSG SNDWTVTMNV PSPARISATW NVGADYPSSQ 
VLTARPNGNG NNWGVTIDHN GNWTWPTVSC SAN