| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2544 |
|---|
| Symbol | |
|---|
| ID | 9246395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 3033175 |
|---|
| End bp | 3034077 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003680469 |
|---|
| Protein GI | 297561495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0984343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.803064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCA CCCGGTTGCG CCTGCTGGTC GAACTGGAGC GGCTGGGCAC GATGGCCGCC
GTGTCCGAGG TCACGGGCAT GAGCACGTCG GCGGTCTCCA AGCACTTCGC CGTCCTGGAG
CGGGAGGCGG GCGTGCCGCT GATCGCGCCC GACGGGCGGC GGGTGCGCCT GACCCCGGCC
GGGCGGCGGC TGGCCGAGCA CGCGGTGGGC ATCCTGGCGC GGGTGGAGGC GGCGCGGGCG
GAGTTCGACG GCGAGGGCGA GCCGGTCGGC CGCGTCGACC TGGTGATGTA CACCACGGCG
GCGCCCCTGG TGCTGCCCGC GCTGCGCCGT CTGCGGCGCG ACCACCCCGG GATCGACGTC
CACCTGACCG AGCACGAGTC CGAGCACGCG CTGGAGCTGC TCCAGGACGG GCGGGCGGAC
CTGGGGGTGG TGTACCAGTA CAGCCTGCTT CCCCGGGATT TTCCGGGGAC GCTGACGGTG
CACCCGATCG GGAGTGAGGA CCTGCTGCTC GCCCAGCCCT CGGAGGGCGC CGACAGCCGC
ACCCTGACCC GGCGGCGGCT GCGGGAGCTG GCGGAGGCGG CGTGGATCGT CAGCCCCTAC
CGGCGCGACG AGGAGGCGCT GGTGCAGCGC ATGTGCGCCG AGGCCGGGTT CACGCCGCGC
GTCGTCCACC GCATCGACAA CCTGGAACTG TTCGAGCAGC TGGCGGCGGA GGGTCTGGGG
GTGGGCGTGG TGCCGCGGTT GTCGGCGGTG ACCCGGCGCG GGGTGGCACA CGCGCCCCTG
GGCGAACTCG GCGGGGTCCG CCGCGTCCAC CTGGCGGGCC GCACCGGCGG ATGGGCGTGG
AAGCCCATCC GCCTGGTGGC GGAGTACCTG CGCGAGTCGG CCGCGGGCGT GCTGGCCGGG
TAG
|
|---|
| Protein sequence | MDFTRLRLLV ELERLGTMAA VSEVTGMSTS AVSKHFAVLE REAGVPLIAP DGRRVRLTPA
GRRLAEHAVG ILARVEAARA EFDGEGEPVG RVDLVMYTTA APLVLPALRR LRRDHPGIDV
HLTEHESEHA LELLQDGRAD LGVVYQYSLL PRDFPGTLTV HPIGSEDLLL AQPSEGADSR
TLTRRRLREL AEAAWIVSPY RRDEEALVQR MCAEAGFTPR VVHRIDNLEL FEQLAAEGLG
VGVVPRLSAV TRRGVAHAPL GELGGVRRVH LAGRTGGWAW KPIRLVAEYL RESAAGVLAG
|
|---|
| |