Gene Ndas_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2522 
Symbol 
ID9246373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2992036 
End bp2992788 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003680447 
Protein GI297561473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.886047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000126478 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTCCTCGG ATCGCATCGC TCTGGTTACC GGAGCCAACC AAGGTATGGG CAAGCAGGTC 
GCGAAGGAGC TGACCGCCGA CGGGGTGACC GTGTTCGTCG GTTCCCGCGA CGCCGCCCGC
GGCGAGGCGG CCGCCGCCGA GATCGGAGCC GGCGCGACCC CGCTCCAGCT CGACGTGACG
GATCCTGAGT CGGTCGCCTC GGCGGCCCAG CGGCTCCGCG AGGAGGCCGG TCGGCTCGAC
CTCCTCGTCA ACAACGCCGC CGTCTCCACC ACTCGGCAGG GTGTCGACAT GGCCGAACTG
CGCTCCTTCG CAGCGGCGAG CGTGGTCCCG CTGGAGGAGG TGCGGGCTGT CTGGGAGGTG
AACGTCTTCG GGCCTGTGGC GGTGTACCAG GCCGTGCTCC CGCTGCTCCG CCTGTCATCG
GACGCACGCA TCGTCAACGT CACGAGCGCG CTCGGTTCTC TGACGACCGT CACCGACCCG
ACTCTCCCCT ACCACGCGCT CTTCGAGCCG GTCTACGCGG CGTCGAAGGC GGCGCTCAAC
GCCGTGACGG TGGCGATGAT GGCCGAGCTC CGGGACTCCG GTGTCAAGGT CAACCTCGTT
TCGCCGGGGT TCGCGAACAC CTCGCTGGTC AACTTCGAGG GCACGGAGTC GGTCGAGGAC
GCCGCTCGTG AGATCGTGCG TGTCGCCCGG CTCGGGCCCG AAGGGCCCTC CGGCACCTTC
ACGACGTGGG AGGGAGCGAA CCTCCCGTGG TGA
 
Protein sequence
MSSDRIALVT GANQGMGKQV AKELTADGVT VFVGSRDAAR GEAAAAEIGA GATPLQLDVT 
DPESVASAAQ RLREEAGRLD LLVNNAAVST TRQGVDMAEL RSFAAASVVP LEEVRAVWEV
NVFGPVAVYQ AVLPLLRLSS DARIVNVTSA LGSLTTVTDP TLPYHALFEP VYAASKAALN
AVTVAMMAEL RDSGVKVNLV SPGFANTSLV NFEGTESVED AAREIVRVAR LGPEGPSGTF
TTWEGANLPW