Gene Ndas_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2460 
Symbol 
ID9246310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp2918783 
End bp2920069 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content68% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003680386 
Protein GI297561412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAG CACCCAAAGT GGCCCCCGGG GAATGTTCCC CGGCCGTGGC CGCGCTGGCC 
GGTGCGCGCG AGATCATCCA CCAAGCGTTG AACGCCGAAG TCCCGCCCGG GGCCGACGAG 
ACCGCCGCGG AGGAGATCGC GGCGCTGTGG GCGCAGCTGG ACCAGATCCG GTATCAGGCG 
TTGACGCAGA TGGCGCGCCT GTACGCACGT GGTGAGGTCG CCCGTTACAG CGGCTACAGC 
ACGTTGGACA AGTGGATCAC CCATCGCTGC AAGGTCCCCA CTGCCCAGGC CAAGGATTTG 
GCCCGTTTGG CCCAGCACGT GCAGGAGGAG ACGTTGCCCG CCACTGCCCA AGCAGTAGCT 
GAGGGCAGGG TGGTGTTGGG TGAGGCGGTC GCGATCGCCA AAGCCACCGA CAAAGCCGTC 
CAGACCCGCG ATGAGGACCA CTTTCCCGAT GAGGGGGAGT ACCGGCAGGG GTTCGAAGCG 
GCTCTGGTGG CCGCCAAGGC GGAGCGGCCC GCGTTGTCGG TCAACCAGCT CCAGTCGGTG 
GCCCGCCAGG TCGCCTACCG TTTGGACCCC CACCGCCTGG ACCGCGACCA CGAGACCGCC 
CATGCCGCCC GTGGACTGAC GGTCCATGAC ACGTTCCAGG GCAGCTACCA ACTCCAGGCC 
TGGGGCGGGT CTGGGGATGC GTTGGTCGTG CGCGCGGCCA TCGACACCTT CGACGTTTCG 
CACTCGGATG AGGACACGCG CAGTCGTTCG CAGCGTGAGC ACGACGCGCT CATCGCGGCG 
CTGCGTTTTG CCACCACCCA CACCGGATGC GGCAACGCTC CGGCTCCGTT GGCGCAGATC 
CGCATCGTGG TGCCCGTGCA GACCTATCTG GACGCCCAAG GCCAGGAGGT TCCGGCGTTG 
GACGAGCACG GTCGGGTGAT CCCGGTCGGG CTGGTGCACG AGTTGGCCGC CGATTCTGAG 
GTGGTGCGGA TGCTCACCGC ACCGCCCACC GGGCAGGTGT TGGATGTGGG CCACAGCCGC 
CGCCTGGCCT CAACCCGCCA ACGCACCGCC GCTTTCCACG GACACGCCAC CTGCGCGCAC 
CCGGGCGGAT GTGAGGTACC GGTGGCGTTG TGCCAGGCCG ACCACGTCAC CTCGTTCTCC 
CGGGGCGGGC GCACGGTGGT CGCCAACCTG CAACCGTTGT GCGGGCCGCA CAACCGGGCC 
AAGTACCAAC GCGAACTGCG CACACACCGA CAGCGGGAAC GGCATCATCC GCCCGACAGG 
ATTCCGGTTC CACCGCCCCG GGAATGA
 
Protein sequence
MIAAPKVAPG ECSPAVAALA GAREIIHQAL NAEVPPGADE TAAEEIAALW AQLDQIRYQA 
LTQMARLYAR GEVARYSGYS TLDKWITHRC KVPTAQAKDL ARLAQHVQEE TLPATAQAVA 
EGRVVLGEAV AIAKATDKAV QTRDEDHFPD EGEYRQGFEA ALVAAKAERP ALSVNQLQSV 
ARQVAYRLDP HRLDRDHETA HAARGLTVHD TFQGSYQLQA WGGSGDALVV RAAIDTFDVS 
HSDEDTRSRS QREHDALIAA LRFATTHTGC GNAPAPLAQI RIVVPVQTYL DAQGQEVPAL 
DEHGRVIPVG LVHELAADSE VVRMLTAPPT GQVLDVGHSR RLASTRQRTA AFHGHATCAH 
PGGCEVPVAL CQADHVTSFS RGGRTVVANL QPLCGPHNRA KYQRELRTHR QRERHHPPDR 
IPVPPPRE