Gene Ndas_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2416 
Symbol 
ID9246266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2865959 
End bp2866726 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content73% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003680343 
Protein GI297561369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0691518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC AGGCCAAGGC CATGAGCGAC CAGGGGCTGG AGACGGCCCG CAAGGTGATC 
GTGGTGACGG GGGCCAGCAG CGGGATCGGC GAGGCCGCGG CGCTGCGCCT GGCCGCCGAG
GGGCACCACG TGGTGCTCGG GGCCAGGCGT GAGGAGCGCC TGCGCGCACT CGTCCAGCAG
ATCCGCGACT CCGGCGGCAG CGCCGAACAC CGCGGCCTCG ACGTCACCGA CCCCGACAGC
GTGCGGGAGG CGCTCGACGC CACCGTGCGC GAGCGGGGGC GCGTGGACGC CCTCGTCAAC
AACGCCGGGG TCATGCCGCT GTCCCGGATG GACGCGCTGC TGGTGGAGGA GTGGCACCGG
ATGGTCGACG TCAACGTCAA GGGGCTGCTG CACGGTGTGG CCGCGGCGCT CCCGCACTTC
CAGCGCCAGG GCTCGGGGCA CTTCGTGACC GTCGCCTCGA TCGGCGCGCA CGAGGTCGTG
CCCACGTCGG CGGTGTACTC GGGGACCAAG TTCGCCGCGT GGGCCATCAC CGAGGGGCTG
CGGCTCGAAC TCGACCCGGG CATCAGGGTG ACCACGGTCT CCCCGGGCGT GGTCGAAAGC
GAGCTGGCTG ACCACATCAC CGACCCGGGG GCGCGGGAGG CGATGCGCAC CTACCGCCGC
AACGCGCTGC CCGCCGACGC GATCGCCCGG GCGATCGCGT TCGCCCTCGA CCAGCCCGCG
GACGTGGACG TCAACGAGAT CATCGTCCGA CCCGCCGCCC AGCGCTGA
 
Protein sequence
MNDQAKAMSD QGLETARKVI VVTGASSGIG EAAALRLAAE GHHVVLGARR EERLRALVQQ 
IRDSGGSAEH RGLDVTDPDS VREALDATVR ERGRVDALVN NAGVMPLSRM DALLVEEWHR
MVDVNVKGLL HGVAAALPHF QRQGSGHFVT VASIGAHEVV PTSAVYSGTK FAAWAITEGL
RLELDPGIRV TTVSPGVVES ELADHITDPG AREAMRTYRR NALPADAIAR AIAFALDQPA
DVDVNEIIVR PAAQR