Gene Ndas_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2407 
Symbol 
ID9246257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2858637 
End bp2859464 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003680334 
Protein GI297561360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0419558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACG TGACCACCCG CGACGGCGTC GAGATCTTCT ACAAGGACTG GGGGAGCGGC 
CGACCGGTCG TGTTCATCCA CGGCTGGCCG CTCAACGCCG ACGCGTGGGA GGACCAGATG
AAGTGGGTGG CCGACAACGG CTTCCGCGGC CTCGCCCACG ACCGCCGCGG CCACGGCCGT
TCCGGCCAGC CCTGGAGCGG CTACGACTTC GACACCTTCG CCGACGACCT CAACGACCTC
ATGAACCACC TGGACCTCCA GGACGTCACG CTGGTGGCCC ACTCCATGGG CGGCGGCGAG
CTCGCCCGCT ACATCGGGCG CCACGGCACC CGGCGCGTGC GCCAGGCCGT CCTGCTGTCC
GCGGTCCCGC CGATCATGGT CAGGTCCGAC ACCAATCCCG AAGGGGTGCC CGAGGAGGTG
CTCACCGGGA TCAAGGACGG CATCATCAGG GAGCGCTCGC AGTTCTGGAG GGAGACCGCG
GAGGGCTTCT TCGGCGCCAA CCGCCCCGGC AACAAGGTCA CGCAGGGCAA CAAGGACGCC
TTCTGGTTCA TGGCCATGCA CCAGTCCATC GAGGCCGGTG TGCGCTGCGT GGACGCCTTC
GGCTACACCG ACTTCACCGA TGACCTGCGC CGCTTCGACG TCCCGACCCT GGTGGTGCAC
GGCGACGACG ACCAGGTCGT GCCGATCGAC GCCACCGGCC GCAAGTCGGC GCGGATCATC
CCGGACGCCA CCCTGAAGGT CTACGAGGGC GGCTCCCACG GCATCGCCCT CGTGCCGGGC
GACAAGGAGA GGTTCAACCA GGACCTGCTG GAGTTCCTCA AGAGCTGA
 
Protein sequence
MAYVTTRDGV EIFYKDWGSG RPVVFIHGWP LNADAWEDQM KWVADNGFRG LAHDRRGHGR 
SGQPWSGYDF DTFADDLNDL MNHLDLQDVT LVAHSMGGGE LARYIGRHGT RRVRQAVLLS
AVPPIMVRSD TNPEGVPEEV LTGIKDGIIR ERSQFWRETA EGFFGANRPG NKVTQGNKDA
FWFMAMHQSI EAGVRCVDAF GYTDFTDDLR RFDVPTLVVH GDDDQVVPID ATGRKSARII
PDATLKVYEG GSHGIALVPG DKERFNQDLL EFLKS