Gene Ndas_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2406 
Symbol 
ID9246256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2856850 
End bp2858379 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content73% 
IMG OID 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003680333 
Protein GI297561359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0466191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTT CGACGACATC CAGCACCGTG GGCGACATCC TCCGGCGCAG CGCGGCGCGC 
ACCCCCGGGC GTACCGCGCT GGTCTTCGGC GGGCGCTCCT GGACCTACGC CGACCTGGAC
GCCGCGGTCA CCCGGGCCGC CGCACGCCTG CTCGGCCTCG GCGCCGTCCG GGGCGACCGG
GTCGCGGCCT ACGGCAGGAA CTCCGACGCC TACCTCATCG GGTTCCTGGC CTGCGCCCGG
GCGGGGCTGG TCCACGTGCC GGTCAACTTC GCCCTCAAGG GGGAGGAGCT GGCCTACCTG
CTGGAGCAGT CCGGCAGCAC CATCGTCCTG ACCGACCCCG CCCTGCGCCC GGCCGTGGAC
GCGCTGCGCG ACGGGACCGG CGTGGAACAG GTGCTGGAGC TGCGCGAGGG CCCCGGTTCG
CTGCTCGCCG ACAGCCTGGA GGGGCCGGTG CCCGAACTGG ACGCCGGGGT CCGCGACACC
GACCTGGTGC AGCTGCTGTA CACCTCCGGT ACCACCTCCC GCCCCAAGGG CGCGATGATG
ACCCACCGGG CCCTCGTCCA CGAGTACCTG TCCTGCGTGG TGGGCCTGGA CCTGTCCGCC
GACGACGAGC CCCTGCACGC CATGCCGCTC TACCACAGCG CGCAGATGCA CGTCTTCCTC
ATGCCGTGGC TGGCGGTCGG GGCACGCAAC ACCCTGGTGG AGGCGCCCGA CCCCGCCGAC
CTGCTGGAGC GGATCGAGAC GGCCGGACAC CGGGCCTTCT TCGCCGCGCC CACGCTGTGG
GTGGCGATGG CGGGCCACCC CGACTTCGCC CGGCGCGACC TGACGAGCCT GCGCAAGGCC
TACTACGGGG CCTCCGTCAT GCCCGGCCCG GTGCTGGAGA GGCTGCGTTC GACCCTGCCC
GGACTGGGCT TCTACAACTG TTTTGGCCAG AGCGAGATCG GCCCGCTGGC CACCGTGCTG
CGCCCCGAGG AGCACGACGC GCGCCCCGCC TCCGCGGGCC GATCCGCCCT GTTCGTGGAA
CTCAGGGTGG TGGACGACAG CGGCCGCGAC GTCGCCCCCG GGGAGCTGGG CGAGGTGGTG
TACCGGTCGC CGCAGCTGTG CCAGGGTTAC TGGGACAAGC CCGAGGAGAC CGAGGAGGCC
TTCCGGGACG GCTGGTTCCA CTCCGGCGAC CTGGTGCGCG CCGACGCCGA GGGCTACATC
GAGGTGGTGG ACCGGATCAA GGACGTCATC AACACCGGCG GCGTGCTGGT GGCCTCCCGC
GAGGTGGAGG ACGCCCTGTA CACCCACCCC GGGGTGGCCG AGGCCGCGGT GGTCGGCGCG
CCCGACGAGA GGTGGATCGA GGCGGTGACC GCGTTCGTGG TGCCCACCGG GGAGGCCGAC
CCCGAGACCC TGCCCGACGA CCTGGTGGAG CACGTGCGCG CCCGTCTGGC GGCGTTCAAG
GCCCCCAAGG AGGTACGGGT GGTGGACGAG CTGCCGCGCA ACGCCTCCGG CAAGATCCTC
AAGCGCGAGC TGCGCGACCG CATCGCCTGA
 
Protein sequence
MTGSTTSSTV GDILRRSAAR TPGRTALVFG GRSWTYADLD AAVTRAAARL LGLGAVRGDR 
VAAYGRNSDA YLIGFLACAR AGLVHVPVNF ALKGEELAYL LEQSGSTIVL TDPALRPAVD
ALRDGTGVEQ VLELREGPGS LLADSLEGPV PELDAGVRDT DLVQLLYTSG TTSRPKGAMM
THRALVHEYL SCVVGLDLSA DDEPLHAMPL YHSAQMHVFL MPWLAVGARN TLVEAPDPAD
LLERIETAGH RAFFAAPTLW VAMAGHPDFA RRDLTSLRKA YYGASVMPGP VLERLRSTLP
GLGFYNCFGQ SEIGPLATVL RPEEHDARPA SAGRSALFVE LRVVDDSGRD VAPGELGEVV
YRSPQLCQGY WDKPEETEEA FRDGWFHSGD LVRADAEGYI EVVDRIKDVI NTGGVLVASR
EVEDALYTHP GVAEAAVVGA PDERWIEAVT AFVVPTGEAD PETLPDDLVE HVRARLAAFK
APKEVRVVDE LPRNASGKIL KRELRDRIA