Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2406 |
Symbol | |
ID | 9246256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2856850 |
End bp | 2858379 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003680333 |
Protein GI | 297561359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0466191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGTT CGACGACATC CAGCACCGTG GGCGACATCC TCCGGCGCAG CGCGGCGCGC ACCCCCGGGC GTACCGCGCT GGTCTTCGGC GGGCGCTCCT GGACCTACGC CGACCTGGAC GCCGCGGTCA CCCGGGCCGC CGCACGCCTG CTCGGCCTCG GCGCCGTCCG GGGCGACCGG GTCGCGGCCT ACGGCAGGAA CTCCGACGCC TACCTCATCG GGTTCCTGGC CTGCGCCCGG GCGGGGCTGG TCCACGTGCC GGTCAACTTC GCCCTCAAGG GGGAGGAGCT GGCCTACCTG CTGGAGCAGT CCGGCAGCAC CATCGTCCTG ACCGACCCCG CCCTGCGCCC GGCCGTGGAC GCGCTGCGCG ACGGGACCGG CGTGGAACAG GTGCTGGAGC TGCGCGAGGG CCCCGGTTCG CTGCTCGCCG ACAGCCTGGA GGGGCCGGTG CCCGAACTGG ACGCCGGGGT CCGCGACACC GACCTGGTGC AGCTGCTGTA CACCTCCGGT ACCACCTCCC GCCCCAAGGG CGCGATGATG ACCCACCGGG CCCTCGTCCA CGAGTACCTG TCCTGCGTGG TGGGCCTGGA CCTGTCCGCC GACGACGAGC CCCTGCACGC CATGCCGCTC TACCACAGCG CGCAGATGCA CGTCTTCCTC ATGCCGTGGC TGGCGGTCGG GGCACGCAAC ACCCTGGTGG AGGCGCCCGA CCCCGCCGAC CTGCTGGAGC GGATCGAGAC GGCCGGACAC CGGGCCTTCT TCGCCGCGCC CACGCTGTGG GTGGCGATGG CGGGCCACCC CGACTTCGCC CGGCGCGACC TGACGAGCCT GCGCAAGGCC TACTACGGGG CCTCCGTCAT GCCCGGCCCG GTGCTGGAGA GGCTGCGTTC GACCCTGCCC GGACTGGGCT TCTACAACTG TTTTGGCCAG AGCGAGATCG GCCCGCTGGC CACCGTGCTG CGCCCCGAGG AGCACGACGC GCGCCCCGCC TCCGCGGGCC GATCCGCCCT GTTCGTGGAA CTCAGGGTGG TGGACGACAG CGGCCGCGAC GTCGCCCCCG GGGAGCTGGG CGAGGTGGTG TACCGGTCGC CGCAGCTGTG CCAGGGTTAC TGGGACAAGC CCGAGGAGAC CGAGGAGGCC TTCCGGGACG GCTGGTTCCA CTCCGGCGAC CTGGTGCGCG CCGACGCCGA GGGCTACATC GAGGTGGTGG ACCGGATCAA GGACGTCATC AACACCGGCG GCGTGCTGGT GGCCTCCCGC GAGGTGGAGG ACGCCCTGTA CACCCACCCC GGGGTGGCCG AGGCCGCGGT GGTCGGCGCG CCCGACGAGA GGTGGATCGA GGCGGTGACC GCGTTCGTGG TGCCCACCGG GGAGGCCGAC CCCGAGACCC TGCCCGACGA CCTGGTGGAG CACGTGCGCG CCCGTCTGGC GGCGTTCAAG GCCCCCAAGG AGGTACGGGT GGTGGACGAG CTGCCGCGCA ACGCCTCCGG CAAGATCCTC AAGCGCGAGC TGCGCGACCG CATCGCCTGA
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Protein sequence | MTGSTTSSTV GDILRRSAAR TPGRTALVFG GRSWTYADLD AAVTRAAARL LGLGAVRGDR VAAYGRNSDA YLIGFLACAR AGLVHVPVNF ALKGEELAYL LEQSGSTIVL TDPALRPAVD ALRDGTGVEQ VLELREGPGS LLADSLEGPV PELDAGVRDT DLVQLLYTSG TTSRPKGAMM THRALVHEYL SCVVGLDLSA DDEPLHAMPL YHSAQMHVFL MPWLAVGARN TLVEAPDPAD LLERIETAGH RAFFAAPTLW VAMAGHPDFA RRDLTSLRKA YYGASVMPGP VLERLRSTLP GLGFYNCFGQ SEIGPLATVL RPEEHDARPA SAGRSALFVE LRVVDDSGRD VAPGELGEVV YRSPQLCQGY WDKPEETEEA FRDGWFHSGD LVRADAEGYI EVVDRIKDVI NTGGVLVASR EVEDALYTHP GVAEAAVVGA PDERWIEAVT AFVVPTGEAD PETLPDDLVE HVRARLAAFK APKEVRVVDE LPRNASGKIL KRELRDRIA
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