Gene Ndas_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2346 
Symbol 
ID9246196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2796476 
End bp2797498 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content73% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003680274 
Protein GI297561300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.162139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCC GCACCGACAG CCAGGCGACC GGTGGCACCA TGACCGGCGA CCCGGCGGCC 
GGCGGTGCCG GGGCGGGCGG TCCCGCCTCC CCCGGCCCCC GGCCCGGCCT CCCGCGCGGC
GGCTCCGCCG CGCGGGGCGC CGCCCCCCGC ACGGGGCGGC CCGGTCCGCT GTGGGCGGTG
CCCGGCCTGC TGTACTTCGG GCTCTTCGCC GCCCTGCCGA TGGTGCTGGT GGCCTACCTG
TCCCTGACTT CCTGGGGCGG GCTGGGCTCG CCCCGCTTCA TCGGCCTGGA GAACTGGTCG
CGCCTGGCGG GCGACCCGCT GATGCGCAAC GCCGTGTGGC TGAGCGTGCT GCTGACCGCG
CTCTCCTGGA TCGTGCAGAC CCCCATCAGC CTGCTGCTGG GGGTCTGGGC CGCCGGTCAG
CAGCGCAACC GCGCGGTGCT CTCCGCCGTC TTCTTCCTGC CGCTGCTGCT GTCCTCGGCG
GCGATCGCCC TCGTCTGGCG GGCCCTGCTG GACCCCAACT TCGGTCCGCT GGCCTGGCTG
GGGCCCCGCC TGGGCCTGTC GTCGGTGGAC GTGCTGGGCG GTTCCGACAG CGCGTTCCTG
GTGATCGTGT TCGTCAGCGC CTGGCAGTTC ATCCCGCTGC ACATGCTGCT CTACCAGGGC
GGCGCCCGGC AGATCCCGGC GACGCTGTAC CAGGCGGCCG AGATCGACGG GGCGGGAAGG
CTGCGGGCGT TCTGGTACAT CACGCTGCCC CAGCTCAGGC ACACCATCAC CACGTCGTCG
GTGCTGATGG TGGTGGGCGC GCTGACCTAC TTCGACACCG TGCTCATCAT GACCGGGGGC
GGGCCCGGCA CCAACACCAC CATCGTCCCG TACCTGATGT ACCAGGCCGG TTTCCAGAGC
TGGGAGCTGG GCTACGCCAG CGCCGTCGCG TTCACCCTGG TGGTGACGGC GACGCTGATC
GCCCTGCTCC TGGTCCGCTT CACCGGTTTC GGCGACATGC GCAGCACCCG GGAGGGAATG
TGA
 
Protein sequence
MTGRTDSQAT GGTMTGDPAA GGAGAGGPAS PGPRPGLPRG GSAARGAAPR TGRPGPLWAV 
PGLLYFGLFA ALPMVLVAYL SLTSWGGLGS PRFIGLENWS RLAGDPLMRN AVWLSVLLTA
LSWIVQTPIS LLLGVWAAGQ QRNRAVLSAV FFLPLLLSSA AIALVWRALL DPNFGPLAWL
GPRLGLSSVD VLGGSDSAFL VIVFVSAWQF IPLHMLLYQG GARQIPATLY QAAEIDGAGR
LRAFWYITLP QLRHTITTSS VLMVVGALTY FDTVLIMTGG GPGTNTTIVP YLMYQAGFQS
WELGYASAVA FTLVVTATLI ALLLVRFTGF GDMRSTREGM