| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2304 |
|---|
| Symbol | |
|---|
| ID | 9246154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2752541 |
|---|
| End bp | 2754058 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003680232 |
|---|
| Protein GI | 297561258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCCAG CAGAGGTCCC CCCACCGCTC GCCCTGGTCG ACGTCACCAA GTCCTTCGGA
AGCGTCCGGG CCCTGCGGGG GCTGTCCCTG GAACTGCGCT CCGGAGAGAT CCACGCACTG
GTGGGCGAGA ACGGGGCGGG CAAGTCCACC CTGGTCAAGA CCATCGCGGG GGTGCACCGA
CCGGACGGCG GGCAGGTGCT CGTGGACGGC CGCCCCGCGG AGTTCGCCGC GCCCGTGGAC
GCCCAGCGCG CCGGGGTCGC GGTCATCTAC CAGGAACCCA CGCTGTTCCC CGACCTGTCG
GTGGCCGAGA ACATCTTCGT CGGCCGCCAG CCCCGCACTC GCCTGCGCAC CATCGACCGC
GGCCGCATGC GCCGCGACAC CCGGGAGGTC TTCGCGCGCC TGGGCGTGGA CATGGACCCC
GACCGCCCCG CACGCGGGCT GTCCATCGCC GACCAGCAGC TCGTGGAGAT CGCCAAGGCC
CTCACCCGCC AGGCGCGGGT CCTGGTCATG GACGAGCCCA CCGCCGCCCT GTCCGGTGTG
GAGGCCGAAC GCCTGTTCAC CGTCGCCCGC ACCCTGCGCG ACTCCGGTGC GGCGCTGCTG
TTCATCTCCC ACCGCTTCGA CGAGGTCTTC GCCCTGTGCG ACCGCGTCAC CGTGGTCCGC
GACGGCGCGT TCGTCTCCTG CGACCCCACC GGCGACCTGG ACGTGGACAC CGTCGTGCGC
CGCATGGTCG GCCGCGAGGT CAGCAGCCTC TACCCCAAGG AGGAGGCCGA GCGCGGCGAG
GTCCTGCTGG AGGTCGACGG CCTGACCCGC CACGGCGTGT TCGCCGACGT GTCCTTCTCG
GTGCGCGCCG GGGAGATCGT CGCCCTGGCA GGGCTGGTCG GCGCCGGACG CAGCGAGGTC
GTCCGCGCCG TGTTCGGCGT GGACCGCTAC GACGCGGGCA CCGTGCGGGT GGAGGGCAGG
CCGCTGGCGC CGGGGCGGCC CCGGGCCGCC ATGGCCGCCG GGCTGGCCCT GGTCCCCGAG
GACCGCCGCC AGCAGGGCCT GGTCATGGAG TCCTCCATCG AGCGCAACGC CACCGCCACC
CGCCGCCGAG CGCTCAGCCG CCTGGGGCTG CTGCGCCCCC GAGCCGAACG CGACTCCGCC
CGCGAGTGGG GCGAGCGCCT GAACCTGAGG TTCGGCCGCC TCACCGACCC CGTCTCCACC
CTCTCCGGCG GCAACCAGCA AAAAGTCGTC CTGGCCAAGT GGCTGTCCAC CGATCCCCGC
GTGCTGTTCG TGGACGAGCC CACACGCGGC ATCGACGTGG GCACCAAGGC CGAGGTCCAC
CGCCTGCTGT CCGCCCTCGC GGGCCGGGGG CTGGCCATCG TCATGGTCTC CAGCGAACTC
CCCGAGGTCC TGGGCATGGC CGACCGGGTC CTGGTCATGC ACGAGGGCCG GATCACCGCC
CACCTGGACC GCGCGGAGGC CGACGAGGAG TCGGTCATGT ACGCGGCCAC CGGACAGCGG
CCGAGCGAGG CCGCATGA
|
|---|
| Protein sequence | MDPAEVPPPL ALVDVTKSFG SVRALRGLSL ELRSGEIHAL VGENGAGKST LVKTIAGVHR
PDGGQVLVDG RPAEFAAPVD AQRAGVAVIY QEPTLFPDLS VAENIFVGRQ PRTRLRTIDR
GRMRRDTREV FARLGVDMDP DRPARGLSIA DQQLVEIAKA LTRQARVLVM DEPTAALSGV
EAERLFTVAR TLRDSGAALL FISHRFDEVF ALCDRVTVVR DGAFVSCDPT GDLDVDTVVR
RMVGREVSSL YPKEEAERGE VLLEVDGLTR HGVFADVSFS VRAGEIVALA GLVGAGRSEV
VRAVFGVDRY DAGTVRVEGR PLAPGRPRAA MAAGLALVPE DRRQQGLVME SSIERNATAT
RRRALSRLGL LRPRAERDSA REWGERLNLR FGRLTDPVST LSGGNQQKVV LAKWLSTDPR
VLFVDEPTRG IDVGTKAEVH RLLSALAGRG LAIVMVSSEL PEVLGMADRV LVMHEGRITA
HLDRAEADEE SVMYAATGQR PSEAA
|
|---|
| |