Gene Ndas_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2216 
Symbol 
ID9246066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2646157 
End bp2648019 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content71% 
IMG OID 
Productserine/threonine protein kinase 
Protein accessionYP_003680144 
Protein GI297561170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.5062e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.42315e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTCCCTTA GGCTCGATCC CAGTGACCCG GAACGTATCG GCCGGTACCG GCTGATCGGC 
CGTTTGGGCT CTGGCGGCAT GGGCCAGGTG TTCTTCGGCC GCTCGGCCGG GGGGCGTGCG
GTGGCGGTCA AGCGCATTCA TCCGCACATG GCCGCCGACG CCTCCTTCCG GGAGCGTTTC
GCCCGTGAGG TCAACGCCGC CCGTCAGGTC AGCGGTGCGT TCACCGCGCC GGTGATCGAC
GCGGGTCCCG ATGACGAGGT GCCCTGGCTG GTCACCTCGT ACGTGCCGTC GTTGCCGTTG
GACACGGCGG TGCACGACCA CGGGCCGTTG CCGGAGGCGA GTGTGCGGGT GCTCGCGGCG
GGTCTGGCCG AGGCGTTGGC CGACATCCAC AGGGTGGGGT TGATCCACCG TGACCTCAAG
CCCGGCAACG TGCTGTTGGC CGAGGACGGG CCGCGGGTGA TCGATTTCGG TATCGCCCGT
GCCACCGACG GTACGGCGGC CACGCAGTCG GTGATCGGTA CGCCGGGGTT CATGAGTCCG
GAGCAGGTGC AGGGGGAGGC GCTCACCCCG GCCAGTGACC TGTTCGCCTA CGGTGCGGTG
CTGGCCTACG CGGCGGCGGG GACGGGTCCC TTCGGTGAGG GCAGTATGCC CACCATGGTC
ATGCGCATCA TCAGTCGTGA GCCGGATCTG TCGGGTGTGC CCGAGTCGTT GCGTCATCTG
GTGGCGGCGT GTTTGTCCAA GGATCCGCAG GGTCGTCCGG GGCCGGGGGA GATCCTGGAC
TACCTGGGTG ATGTGGCCAC GGGGCCGACC TGGTTGCCCG CGGCGGTGAT GCGGGGGGTC
CAGGAGCAGG TGGCCAAGGT CAACGGGGCG TTGGCGGCCG CTGCTGGGGA TGGGCGTGTC
ACCGGTCAGC ACCAGCGCAC GGAGGTGTTG GGGCAGGGTG GTGCTGCTGC TGTGGGTGGT
GCGGCGGGAG CTGCGGCTGG TGCGGGTGTG TTCGGTGATG AGGCGGCCAC CCGTGTCACG
CCGCAGGCGC CGGGGCACGA GGGCGGTGCG ACCTCGGTGT GGGGTGAGCA GCAGGGGTAT
GGGGCCACGG CCCGTTTCCC GTCGGGGCAG CAGGTTCCGC CGACCGCCCA GTACGGTCAG
GGCGCCACGG CCTATGGCCA GGGGGCGGCT CACGGTCAGG GCGGTGCTTC CCACGGGCGG
GAGGAGGCCG CGGGTCACCG GCAGCCGGAC CGGCCCAGCC AGGAGGACGC CTACGCCGAC
CTGTACGGCG ATCGGCGTGA TCCGGCCGCG GACGCGCGCC GCCAGCAGCA GGAGCAGTTG
CGTCAGCAGG AGGAGCAGCG CCAGCGGCGG ATGCAGGAGC AGCAGCGCCA CCAGGAGGAG
CAGCGCAGGC GGGCGGAGGA GCAGCAGCGT CAGCAGCAGG AGCAGCGGCT GGAGCACCGG
CGCCGTCAGG AGGCGGAGCG GGCCCACCGT GAGCGGGTGC GGGCCGAGCA GGAGGCCGCG
CGCCGCGCCC AGAGCCAGGC GCGCCATGCC GACCAGCCGG GCCTGTGGGG TTTCGTCAAG
CTGTTGCCGC TGCTGATCAT TCCGCTGATC CAGGTGCCGT TGGGGTACGG GGCGGCGTTG
GCGTGGGCGT GGTTCACCAC CGAGACCGAG GTGTGGACGG GGGCGCCGTA CGCGTTCGAG
CCCTTCCGGT GGGAGTCCTT CTGGCACGCG ATGATGCTGG GGTACTTCAT CTTGAACAAC
CTGGTGTCGT TGGAGTACCT GGTCAGGTCG TTGCGTACGT CGTTCGTCAC GGGTGCGGTG
TTGGCGTTGG GTGCGATCGC GGCGACCAAC GGCCTGCTGT ACAGCTTCGG TTTCTGGGGC
TGA
 
Protein sequence
MSLRLDPSDP ERIGRYRLIG RLGSGGMGQV FFGRSAGGRA VAVKRIHPHM AADASFRERF 
AREVNAARQV SGAFTAPVID AGPDDEVPWL VTSYVPSLPL DTAVHDHGPL PEASVRVLAA
GLAEALADIH RVGLIHRDLK PGNVLLAEDG PRVIDFGIAR ATDGTAATQS VIGTPGFMSP
EQVQGEALTP ASDLFAYGAV LAYAAAGTGP FGEGSMPTMV MRIISREPDL SGVPESLRHL
VAACLSKDPQ GRPGPGEILD YLGDVATGPT WLPAAVMRGV QEQVAKVNGA LAAAAGDGRV
TGQHQRTEVL GQGGAAAVGG AAGAAAGAGV FGDEAATRVT PQAPGHEGGA TSVWGEQQGY
GATARFPSGQ QVPPTAQYGQ GATAYGQGAA HGQGGASHGR EEAAGHRQPD RPSQEDAYAD
LYGDRRDPAA DARRQQQEQL RQQEEQRQRR MQEQQRHQEE QRRRAEEQQR QQQEQRLEHR
RRQEAERAHR ERVRAEQEAA RRAQSQARHA DQPGLWGFVK LLPLLIIPLI QVPLGYGAAL
AWAWFTTETE VWTGAPYAFE PFRWESFWHA MMLGYFILNN LVSLEYLVRS LRTSFVTGAV
LALGAIAATN GLLYSFGFWG