Gene Ndas_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2190 
Symbol 
ID9246040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2617929 
End bp2618585 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003680118 
Protein GI297561144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.43495e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000215707 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCGCCA TCAACCTCGT CGACGACGAA GCCCTCATCC GCGCCGGACT GGCCGCCCTC 
ATCAACGCCG AGGACGACAT GCGGGTCACC GGCCAGGCCG ACGACGGCGC CGACGTACCC
GACCTGGTCC GACGCACCCG ACCCGACCTG GTCCTGATGG ACGTGCGCAT GCCCCGCCTG
GACGGCATCC AGGCCACCCG CACCCTGCAC ACCACCCTGA CCCACCCGCC CCGCGTCATC
GTCCTCACCA CCTTCGACAA CGACGACTAC GTCTGGGGCG CCCTACGCGC GGGCGCCCAC
GGATTCCTCC TCAAACGCAC CCCGCCCGAG GACATCCTGG CCGCCATCCG CCTCGCCCAC
CGCGGCGACA CCCTGCTCTT TCCCACCGCC CTGCGCCACC TGGCCGCCAC CCAACCCGCC
GCCCCCACAC CCGCCGCCCG CGCCGTGGCC ACCCTCACCC AGCGCGAGTC CCAGACCCTC
ACCCTCATGG CCCAGGGGCT CACCAACGCC GAGATCGCCG ACCGCCTCTT CCTGGGCACC
GAGACCGTCA AGACCCACGT CTCCCACATC CTCACCAAGC TCGGCGTCCG CGACCGCACC
CAGGCCGTGA TAGCCGCCTA CGACTCCGGC CTCATCCGCC CCAACACCGG CCGCTGA
 
Protein sequence
MIAINLVDDE ALIRAGLAAL INAEDDMRVT GQADDGADVP DLVRRTRPDL VLMDVRMPRL 
DGIQATRTLH TTLTHPPRVI VLTTFDNDDY VWGALRAGAH GFLLKRTPPE DILAAIRLAH
RGDTLLFPTA LRHLAATQPA APTPAARAVA TLTQRESQTL TLMAQGLTNA EIADRLFLGT
ETVKTHVSHI LTKLGVRDRT QAVIAAYDSG LIRPNTGR