Gene Ndas_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2189 
Symbol 
ID9246039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2616442 
End bp2617932 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content75% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003680117 
Protein GI297561143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.83339e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000292513 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGCCATA TGCAACAGTC ACCGACGGGC CCTCACCTCC CGCGAAACGC CCACCGCACC 
CAACCCGGGC CCCGCTCACC CCGCACGCGG GGGACACACG GGGGAGGGGC GCCCGTCAAC
ACCACACCGG GCGACGCCCG GGCCGCGAAC ACACCCCACC CCCGAACACA CCCCCAGCCT
CACCCCGCCG GGGGAGGCGC CACCGCCCCC GCCTGTGCCA CGATCACCCA CGTGCGCCAC
CTCACCCCGC TCCTGCGCCC GCTCACCAGC GCCCACACCT ACCGGCGCTG GGCCTACCTC
GTCATCGGCG GCGCGCTCCT GATGCCCTAC GCCATGGCCG CCCTCGTCCT GGCGACCCTC
GTCAACCCCA CCCCCGCACC CGCCGCCTTC GCCCTGACCC TCACCGCGGC CCTGGCCGCC
GTCGCCGCCA CCGCCTACCT GCCCGGCACC CGCAGCGCCC AGACCCACCT GGCCCGCGCC
CTGCTCCGCG GCCCCCTCAC CTCCACACCC CGCCCCAACC CCACCTGGCG CAGCAACGCC
CGCACCAGCC TGTGGCTGTG CCTGCACATG CTCACCGGCA TGGCCGTGTG CCTGCTCACC
ATGGTCGCCC TGACCGAGGC CGCCCTCCTG GCCGTCGCAC CCCTGACCCG CGACGTCGCC
ACCATCGCCC AGGGCCCCCT GACCTTCATG GGCCAGACCG CCCTGACCCC CGCCCAGCGC
GCCCTGGGCC CCCTCATCGG CCTCGCCCTG CTCGCCGCCC TGGTCTACAC CACCGCCCTG
GTCGGCCACC TGCTCACCCT GGCCGCACCC CGCCTGCTGG GCCCCTCACC CACCGAACGC
CTGGCCGCCG CCCAGGCCCA CGCCCACACC CTCGCCGAAC GCAACCGTCT GGCCCGCGAA
CTCCACGACT CCCTGGGCCA CGCCCTGTCC GTGGTCACCC TCCAAGCCGC CACCGCCGCC
CGCCTGCTCG ACACCGACCC CGACTTCGCC CGACAGGCCC TCACCCACAT CGCCGACCAG
GCCCGCACCG CCACCGCCGA CCTCGACCAC GCACTGGGCA TCCTGCGCGA GAACACCCCC
ACCCCACGCA CCACACCCCC TGACCTGGCC CACCTGCCCC ACCTGGCCCG CGCCACCCAA
CACACCGGCA CCGACCTGAC CCTGCACCTG AACGGCGACC CCGCACACGT CCCCGCCCTG
CTCTCCCGCG AGACCTACCG CATCAGCCAA GAAGCCCTCA CCAACGCCCT GCGCCACGCC
CCCGGCCAAC CCCTCACCCT CACCCTGGAC ATCACCCCCA CCGCCCTGAC CCTGACCCTC
ACCAACCCCC TCCCGCCCAC CCGCGCCCAC CGCACCCCGC GAGGGCGCGG CCACCACGGC
ATCACCGGCA TGCGCGAACG AGCCCACCTG CTCGGCGGCA CGCTCACCGC CGGCCCCCAC
CACGGCACCT GGCGCCTGAC CTGCCGCCTG ACCTGGAAAG AACAACCGTG A
 
Protein sequence
MCHMQQSPTG PHLPRNAHRT QPGPRSPRTR GTHGGGAPVN TTPGDARAAN TPHPRTHPQP 
HPAGGGATAP ACATITHVRH LTPLLRPLTS AHTYRRWAYL VIGGALLMPY AMAALVLATL
VNPTPAPAAF ALTLTAALAA VAATAYLPGT RSAQTHLARA LLRGPLTSTP RPNPTWRSNA
RTSLWLCLHM LTGMAVCLLT MVALTEAALL AVAPLTRDVA TIAQGPLTFM GQTALTPAQR
ALGPLIGLAL LAALVYTTAL VGHLLTLAAP RLLGPSPTER LAAAQAHAHT LAERNRLARE
LHDSLGHALS VVTLQAATAA RLLDTDPDFA RQALTHIADQ ARTATADLDH ALGILRENTP
TPRTTPPDLA HLPHLARATQ HTGTDLTLHL NGDPAHVPAL LSRETYRISQ EALTNALRHA
PGQPLTLTLD ITPTALTLTL TNPLPPTRAH RTPRGRGHHG ITGMRERAHL LGGTLTAGPH
HGTWRLTCRL TWKEQP