Gene Ndas_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2182 
Symbol 
ID9246032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2606406 
End bp2610002 
Gene Length3597 bp 
Protein Length1198 aa 
Translation table11 
GC content75% 
IMG OID 
ProductRecB family nuclease, putative 
Protein accessionYP_003680110 
Protein GI297561136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000250648 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.09405e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTCCGCA CCACCACCGG TTGGGTCGTC TCACCCACCG ACCTCGTCGA CACCCTGGAG 
TGCGACCACC GCAGCGCCCT GAAGACCGCC CTGGCCGCCC GCGTCGAAGG CGCACCCGCC
CCCACCGACA TCGACCCGCT CGTGGCCCAG CACGGCCTGG CCCACGAACA GGCCGAACTC
GAACGCCTCA GCGCCCTGGT CGAGGTCGTC CGCATGCCCG ACCCCCGCCC CGAGGACGCC
TCCCTGGCCG CGGCCGCCCA GGCCACCGCC GAGGCCATGG CCGCCGGAGT CCCCGTCATC
TACCAGGGCA GCTTCCACCA CCGCCTCACC GAACCCGACC CCGACGGGCA CACGGTGTCC
TTCCACGGCC GCGCCGACTT CCTCATCCGC TCCGACCTGG ACCCCGCCAC CGGCCGCACC
CGCACCCCCG CCCCCGCGAA CTGGACCTAC GAACCCTGGG ACACCAAGCT CGCCCGCCGC
CCCGGCCCCG GCGCCGTCGT CCAGCTCGCC GCCTACGCCC ACGCCGTCAG CGTCGCCACC
GGCCACACCC CCCAGCACAT GCACCTGCTC ACCGGCGACA ACCACACCCA CACCCTGCCC
ACCGCCGACT TCACCCCCAT CCTGAGCACC GTCACCACCC GCCTGCTCAC CCTCCTGGCC
AGCGAACCCG CCCTGCCCGC CCCCACCTGG GGCCAGCCCC GCCCCGCCTG CGAGGGCTGC
GGCTACCAGG CCTGGTGCTC CCAGGGGCGC ACCGCCGCCC GCCACCTGTC CCTGGTCGCC
GGACTGCGCA CCGACCAGGC CGCCAAACTC ACCGACTCCG GACTGGACAC CATCGACGCC
CTCGCCCGGG CCGACGACGA CCAGCGCCCC GCCACCCTGC CCCGCCGCTC CTTCGACCAG
CTGCGCGCCC AGGCCGCCCT CCAGGTCCGC CAGGACCGCA CCCGCACCCC CGACAACCCC
CAGGGCACCG TCACCGCCGA GGTCTTCGCC CCCGACGGCC TGGCCAGCCT GCCCGCCCCC
AGCCCCGGCG ACGTCTTCTT CGACATGGAG GGCTACCCCT ACCACTCCCG CGAGGGCGAA
CGCGGCCTGG AGTACCTCTT CGGCGCCACC ACCGAGGACG CCCACGGAGC CGAGACCTTC
CACGCCTTCT GGGCCCACGA CCGCGCCCAG GAGAAGAAGG CCCTGGAGGA CTTCGTCGAC
TTCGCCACCG CCCGCGTGGA CGCCGACCCC GGCGCCCACG TCTACCACTA CGCCTCCTAC
GAGGTGGACC GCCTCAAACA CCTGAGCTCG GAGTTCGCCA CCCGCGAGGA GGAGGTCAAC
CGGCTCCTGC GCGAGAACCG CCTGGTGGAC CTGTACACCG TCGTGCGCAA GAGCCTGCGC
GTGTCCCAGC GCTCCTACTC CATCAAGTAC CTCGAACCCC TCTACCTGCC CGCCGCCCGC
TCCGGCGGCG TCACCACCGC CACCTCCAGC ATCGACGCCT ACGCCGCCTA CCTGGCCGCC
ACCGAGGCCG GCGACCACGA CCGGGCCGCG CGGGTCCTGG CCGACATCGC CGCCTACAAC
CGCGACGACT GCCACTCCAC CGCGCGCCTG CGCGACTGGC TGGAGGACCA CCGCACCCAC
CAGGGCATCA CCGACCGCCC CCTGGTCCAG CTCGAACTCA CCGAGGCCGA GGCCGAACGC
GCCCGCAAAC GCCAGGAGAA GGCCGCCCGC CACGCCGCCC TCACCGAACC CCTGCTCGAC
CAGGTCCCCG CCCAGGCCCA GGACCGCGAA CCCGACCACC ACACCCGCGC CCAACTGGCC
GCCCTGGTCG GCTACTACCA GCGCGAGAAC CTGCCCCCCT GGCGCGAGCA CTACCGGCGC
ACCAGCGCCC CCCTGACCGA CCTGGAGTCC GACACCGACT GCGCCGTGCC CTGGCAGGTG
CGCGCGGGGG AGTGGATCGA ACCCACCGGC CGCCAGCGCA AGTCCCGCCG CGAACTCTCC
CTGCGCCTGG ACACCGCCCA CCCCCACCCC TTCACCTCCG GCCAGGACGT GCACCTGCTC
TACCCCGGCG CCCCCGGGCA GCCCGCCACC ACCACCCAGG CCAAGGTCGC CGAGGCCGAC
GCCGACACCC TGGCCATCAC CGAGACCTGC GACCCCGACT CCACCTACTC CCGGCCCCCC
GTCGCCGTCC TGCCCGGCTC CCCGGTCAAC CCCGCCCCCA AGGACGGCGC CCTGGAGACG
GTGGCCCGCA CCGCCCTGGA CACCCTGCCC GCGTGGCCCC ACCACCCCGG CCTGGACGTG
CTGCGCCGCA TCCCGCCGCG CCTGAGCGCC CCCGGCCCGC TCCCCGACCC CGCCGACCAC
GACGGCGACC TCATCCAGGC CACCATCGCC GCCGTGGACC GTCTGGAGGG CTCCTACCTC
GCCGTGCAGG GCCCGCCCGG CGCGGGCAAG ACCTACCTGG CCGCCCAGCT CATCACCCAC
CTGGCCCGCC AGGGCAGGAG CGTGGGCGTG TGCTCCACCG GCCACAAGGC CGTGGAGAAC
GTCATGACCG CCGCCCTGCG CGCCGCCGAG GCCGCCGGGG TGGAGGTGGC CGCCGCCAAA
CGCGCCAAGG GGCGCGGCAA GGACACCGAC CAGGACCTGC CCTGGGAACA GCCCTCCAGC
CCCCAGGCCC TGGCCAGCTG GCGCGACAAG CACACCGCCC AGGGCCGCCC CGTCCTCATC
GGCGGCACCG CCTGGGCCAT GTCCAACGCC GCCATGCTCG CCGACCCCCT GGACGTGCTC
ATCATCGACG AGGCCGGACA GTTCGCCCTG GCCGACACCC TCGCCGTCTC CGCCGCCGCC
CGCAACCTCG TCCTGCTGGG CGACCCCCAG CAGCTGCCCC AGGTCGTCCA GGGCACCCAC
GGTGAGGGCG CCGACGCCTC CGCCCTGCAA CACCTCATGG CCGGACGCCA GATCATCGAC
CCCTCACGCG GCTACTTCCT CGACCAGACC CGCCGCATGC ACCCGGCCGT GTGCGCCACC
GTCTCCGCCC TGTCCTACCA GGGCCGCCTG CACGCCCACC CCAGCACCGC CGACCGCACC
CTGGCCACCC TGGCACCGGG CGTGTACACC CTGCCCACCC CCCACCAGGG CCGCACCACC
CACAGCCCCG AGGAGGTCCA GGCGGTGGTG GAGGTGGCCA CCCACCTGGT CACCGACAAG
GTCACCGACG CCGCCGAGAC GCACCCGCGC TCCCTGACCG GCCACGACAT CCTCGTGGTG
GCCCCCTACA ACCTCCAGGT GCGCGCCCTG CGCCGCGCCC TGGCCCGGGC CGCCGACGAC
CACCCCGCCC TGGAGGGAGT GCGCGTGGGC ACCGTGGACA AGTTCCAGGG CCAGGAGGCC
GCCGCCGTCA TCTGCTCGAT GACCACCTCC AACGCCGCCG AGGCCAGCCG CGGCACCGCC
TTCGTCCTGG ACCGCAACCG CCTCAACGTG GCCCTGTCGC GCGCCCAGCT GGTCGCCGCC
GTGGTCTTCT CACCCGACCT GCTCACCACC GCCCCGCGCA GCATCGACGA ACTGCGCCTG
CTGTCCTCCT TCACCCGCCT GACCGAGGGC GCCCGCCCCT GGCCCGCCCG GCGCTGA
 
Protein sequence
MFRTTTGWVV SPTDLVDTLE CDHRSALKTA LAARVEGAPA PTDIDPLVAQ HGLAHEQAEL 
ERLSALVEVV RMPDPRPEDA SLAAAAQATA EAMAAGVPVI YQGSFHHRLT EPDPDGHTVS
FHGRADFLIR SDLDPATGRT RTPAPANWTY EPWDTKLARR PGPGAVVQLA AYAHAVSVAT
GHTPQHMHLL TGDNHTHTLP TADFTPILST VTTRLLTLLA SEPALPAPTW GQPRPACEGC
GYQAWCSQGR TAARHLSLVA GLRTDQAAKL TDSGLDTIDA LARADDDQRP ATLPRRSFDQ
LRAQAALQVR QDRTRTPDNP QGTVTAEVFA PDGLASLPAP SPGDVFFDME GYPYHSREGE
RGLEYLFGAT TEDAHGAETF HAFWAHDRAQ EKKALEDFVD FATARVDADP GAHVYHYASY
EVDRLKHLSS EFATREEEVN RLLRENRLVD LYTVVRKSLR VSQRSYSIKY LEPLYLPAAR
SGGVTTATSS IDAYAAYLAA TEAGDHDRAA RVLADIAAYN RDDCHSTARL RDWLEDHRTH
QGITDRPLVQ LELTEAEAER ARKRQEKAAR HAALTEPLLD QVPAQAQDRE PDHHTRAQLA
ALVGYYQREN LPPWREHYRR TSAPLTDLES DTDCAVPWQV RAGEWIEPTG RQRKSRRELS
LRLDTAHPHP FTSGQDVHLL YPGAPGQPAT TTQAKVAEAD ADTLAITETC DPDSTYSRPP
VAVLPGSPVN PAPKDGALET VARTALDTLP AWPHHPGLDV LRRIPPRLSA PGPLPDPADH
DGDLIQATIA AVDRLEGSYL AVQGPPGAGK TYLAAQLITH LARQGRSVGV CSTGHKAVEN
VMTAALRAAE AAGVEVAAAK RAKGRGKDTD QDLPWEQPSS PQALASWRDK HTAQGRPVLI
GGTAWAMSNA AMLADPLDVL IIDEAGQFAL ADTLAVSAAA RNLVLLGDPQ QLPQVVQGTH
GEGADASALQ HLMAGRQIID PSRGYFLDQT RRMHPAVCAT VSALSYQGRL HAHPSTADRT
LATLAPGVYT LPTPHQGRTT HSPEEVQAVV EVATHLVTDK VTDAAETHPR SLTGHDILVV
APYNLQVRAL RRALARAADD HPALEGVRVG TVDKFQGQEA AAVICSMTTS NAAEASRGTA
FVLDRNRLNV ALSRAQLVAA VVFSPDLLTT APRSIDELRL LSSFTRLTEG ARPWPARR