Gene Ndas_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2181 
Symbol 
ID9246031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2605453 
End bp2606172 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content74% 
IMG OID 
Productrare lipoprotein A 
Protein accessionYP_003680109 
Protein GI297561135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.83407e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.39992e-07 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGGCACAC ACCAGCCCCA GAACCCGCCG GCCGACGAAG AGGCCACCCG CGCCGACGCG 
CCCGTGGGTC CCCGCGTGGC CGCCAAGCGC TCCCGCCGCA AGCGCACCCT GATCCTGGCC
TCGGCCACAG GGGCCGCGCT CCTGGTGGGC GGCACCGCCG CCGCGGCCGT CATCGCCACC
GGCGCCGACC CGGGCAGTGC CACCAACGCC GCGGGCGTCC CCCAGGCAGA CCCGGACCCG
CTGGTCGCCG ACGACGCCAC GCCCAACGCC GGGCAGGAGC AGCAGCAGCT CGCCGAGGAG
GCCGTCAGCT CCGCCACCCA GCGCTCCAGC ACCGACGCCT CCGACATCCT CGAAGAGCCC
GAGGAGGAGG AGACCGAGGA GGCCGAGGAA CCCGCCGCCG ACAGCGGCGG CGACTCCGAG
TCCACCGGTC AGGGCGGCAC CTGCCAGGCC TCCTACTACG GAGCCGACTT CGCCGGACGC
ACCACCGCCA ACGGTGAGAC GTTCGACCCC AACGCCATGA CCGCCGCGCA CAAGACCCTG
CCCTTCGGCA CCCAGGTCCA GGTCACCAAC CCGAGCAGCG GCGCGTCCGT GACCGTGCGC
ATCAACGACC GCGGCCCCTA CGTGGACGGA CGCTGCCTGG ACCTGTCCAC CGCGGCCTTC
GACCAGATCA TCGGCACCGG AGCCGGTGTG GGCCAGGTCG ACTGGCAGGT CGTGGGGTAA
 
Protein sequence
MGTHQPQNPP ADEEATRADA PVGPRVAAKR SRRKRTLILA SATGAALLVG GTAAAAVIAT 
GADPGSATNA AGVPQADPDP LVADDATPNA GQEQQQLAEE AVSSATQRSS TDASDILEEP
EEEETEEAEE PAADSGGDSE STGQGGTCQA SYYGADFAGR TTANGETFDP NAMTAAHKTL
PFGTQVQVTN PSSGASVTVR INDRGPYVDG RCLDLSTAAF DQIIGTGAGV GQVDWQVVG