Gene Ndas_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2155 
Symbol 
ID9246005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2577425 
End bp2578399 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content73% 
IMG OID 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_003680083 
Protein GI297561109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.190178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGCTG ACCGGCTGGT CTCACTGGTT CTGCTGCTGC GCCAGCGCGG TCGGCTGTCA 
GCGGCCACGC TGGCCCGCGA GCTGGAGGTG TCCACACGCA CCGTGCTGCG CGACATCGAG
GCGCTGTCCG CGGCCGGTGT GCCGGTCTAC GCCGAACGCG GTCGGCACGG CGGTTTCGCG
TTGCTGCCCG GTTTCCAGAC GGAGCTCACC GGCTTGAACC ACGACGAGGC GCTCGCCCTG
CTGGTCGCCG GATCGCGGCG GGGCGCGCAG GCGTTCGGCC TCGGGGCGGC GCTGGCCTCG
GCCATGCGCA AGGTGGTCGA CGCGCTGCCC GAAGGCGATC GGGCCACCGC GGCCGGTGCG
GCCCAGCGGT TGCTCATCGA CCCGGAGACC GATCTGCTCT CGCGTCGACC GGCTGTCGAG
GAGGTGCCCG ACACCGTGGT GGCCGTGATC CGGCGGGCGG TGTTCGACGG GCACAGGCTG
CGCATCCGCT ACGCGGCTGT GGACCAGGAC CCGAAGTGGC GCACTGTGGA CCCGGTCGGT
CTGGTCACCG TGCGCGACCG GGGCTACCTG CTGGCCACCA GGTCCGGCCA GGACCGCACC
TACAAGCTGT CCCGGGTCCT GGAAGCCGAG GAGCTCCCCG AACCCGCGCA GCGGCCGGAG
CGGATCGACC TGGACCGGGT CTGGCAGGAG CGCAGCACGC GGTTCCGGAC CGGCGGTGAC
CAGGTCACCG TGTTGGTGCG GGCGGCCCCG GAGCGGCGGG AGGACCTGGT GGGTACGGCG
CTGGCCGTCC GCGCCGAAGA AGTCGACGCG GACGGCTGGC TGCGGCTGGA GTTGACCTTC
CAGGACGCGA GGCACGCCGA ATGGGCGCTG TGGCAGCTCG CCACGGACGC GGAGGCCCAG
GACCCGCAGT GGCTGCGCGC CTGCCTGCGC GACCGAGCCG TCGCGATCGC CGCCCGTTAC
GGAATGCCGC TCTGA
 
Protein sequence
MRADRLVSLV LLLRQRGRLS AATLARELEV STRTVLRDIE ALSAAGVPVY AERGRHGGFA 
LLPGFQTELT GLNHDEALAL LVAGSRRGAQ AFGLGAALAS AMRKVVDALP EGDRATAAGA
AQRLLIDPET DLLSRRPAVE EVPDTVVAVI RRAVFDGHRL RIRYAAVDQD PKWRTVDPVG
LVTVRDRGYL LATRSGQDRT YKLSRVLEAE ELPEPAQRPE RIDLDRVWQE RSTRFRTGGD
QVTVLVRAAP ERREDLVGTA LAVRAEEVDA DGWLRLELTF QDARHAEWAL WQLATDAEAQ
DPQWLRACLR DRAVAIAARY GMPL