Gene Ndas_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2089 
Symbol 
ID9245939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp2510218 
End bp2511447 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content71% 
IMG OID 
Productmembrane protein 
Protein accessionYP_003680021 
Protein GI297561047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGTC GGGACAGGGC GGGCGCGGAC GGGGCCGTGG CCCGCGCACG CGCGTGGGTG 
AGCCGTGCGG TGGGTTCGGA CGGGCACGAA CGGCACACGG CGCTGTCCAT CGGCAAGAGC 
GCCCTGGCCG CCTCGTTGGC GTGGTTCGTC GCACAGCACC TGATCCAGGC CGCCTCACCG 
GCCTTCGCGC CCTTCACCGC GGTCCTGATG ATGCAGGTCA CCGTCTACCA GTCGGTGGTC 
CAGTCGCTGC GCTACGTGGG CGCGGTGGCG CTGGGGATCA CCGTGCAGGC CGTCCTGGGC 
TTCGCCGCGG GCCCGGACAT GCTGACCTTC GTCGTGGTCA CGCTCATCGC CCTGGTCATC 
GGCCGGTGGA GGCCCCTGGG CAGCCAGGGG TCCCAGGTGG TCACGGCCGC GTTCTTCGCC 
TTCTCCACCT TCCTGTCCTC CCAGGGCTAC ACCGGGCGCC TGGTGGACCT GGCCCAGATC 
CTGTTGCTGG TGCTCATCGG CTGCGCCATC GGCACCGCGG TCAACGTCCT CGTGCTGCCG 
CCCATGCGCT TTCGCAGCGC GGAGTACGCC ATCCGCTCCC TCGCGCACGC CGAGTGCGAC 
CTGATCGGGG ACATCCGGCG CGGAATGGAA CGGGGGGAGC TGACCGAGGA CGAGGCCGAG 
GACTGGCGCC AGCGGGCCAA CCGGCTCGCG TCGACCGTCC GGCAGACCCG TTCGGCGGTG 
GACACCGCCT GGGAGAGCGT CTACCTCAAC CCGGCCAGGC TCCTGCGCAG ACACCGCCAC 
CACGTCGCCT TCGAGGGCTA CCAGCAGTTG GTCGACGCCC TGGAGCGCAC CACCCACCAG 
CTGGGCTCCC TGGCCCGCAG CATCCACCTG TGGAGCCGTG ACGGGGAGCG CTCCGTCCAC 
CAGGACTTCC TGAGCCTCTA CGGGGACTTC CTCGCCTCGA TCGCCGAGAT CACCCGCGAG 
CTCAGCGGGT TGGACCAGGA CCGGCTCGGC CCCCAGGCCA GGAGGCTGTG CCGGCTCGCG 
GAGCAGGCCC GGGAGCGCTA CGACGACCTC GTGCGGGCCA AGGAGGGCGA GGACGCCCCG 
CCCTTCGACG ACCTCCGGCT GCCCTACGGC GTGCTCCTGA TCGAGGCGCA GCGGCTCATG 
GACGAGTTCC AGTACAGCTG TGACGTGATC CTGCACTACG TGGACCGCCC CGGTCCCGCG 
GACGGGTCCG GCGGCGCCCG CCACATCTGA
 
Protein sequence
MTGRDRAGAD GAVARARAWV SRAVGSDGHE RHTALSIGKS ALAASLAWFV AQHLIQAASP 
AFAPFTAVLM MQVTVYQSVV QSLRYVGAVA LGITVQAVLG FAAGPDMLTF VVVTLIALVI 
GRWRPLGSQG SQVVTAAFFA FSTFLSSQGY TGRLVDLAQI LLLVLIGCAI GTAVNVLVLP 
PMRFRSAEYA IRSLAHAECD LIGDIRRGME RGELTEDEAE DWRQRANRLA STVRQTRSAV 
DTAWESVYLN PARLLRRHRH HVAFEGYQQL VDALERTTHQ LGSLARSIHL WSRDGERSVH 
QDFLSLYGDF LASIAEITRE LSGLDQDRLG PQARRLCRLA EQARERYDDL VRAKEGEDAP 
PFDDLRLPYG VLLIEAQRLM DEFQYSCDVI LHYVDRPGPA DGSGGARHI