Gene Ndas_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2087 
Symbol 
ID9245937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2507684 
End bp2508427 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content75% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003680019 
Protein GI297561045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.73112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGAC CGACGCGGGC GACGGGGGCC GGAGAGGGCA CCGGGGTCAC GCGCGTCCTC 
GTCGCCGACG ACCAGGCGAT GGTCCGCGGC AGTTTCCGCG TCCTGGTCGA CCACACCCCC
GGGCTGAGCG CCGTCGGCGA GGCCGCCGAC GGAGCCGAGG CCGTGGAACT CGCCCGCCGC
GAACGGCCCG ACGTCGTCCT CATGGACATC CGCATGCCCG GGCTGGACGG CATCGGTGCC
ACCCGGCGTA TCTGCGCCGA TCCCGCGACG GCGGGCGTCC GCGTCCTCAT CCTCACCACC
TTCGACCTGG ACGAGTACGT CTACGCCGCC CTCCGCGCGG GCGCGGCGGG CTTCCTGCTG
AAGGACACGC CGCCGTCGCG GGTCCTGGAC GCCATCACCG TCGTCGCCGC GGGGGACGCC
CTGCTGGCCC CCTCGGTCAC CCGGAGGCTC ATCTCCGAGT TCGCCCGCCT CCCCGAGCCG
GGACGCCCTC CGGCCCGCGC CCTCGACGGC GTCACGGACC GCGAGGTGGA GGTCCTCGGG
CTGATCGCCC GCGGCCTGTC CAACACCGAA CTGGCCGAGC ACCTGCACCT GAGCCTGGCC
ACGGTCAAGA CGCACATCGG GCGGCTGCGG GCCAAACTCG GGGCGCGCGA CCGCGCGCAG
CTGGTGATCA CCGCCTACGA GACGGGCCTG GTGGGCGACC GGCGTCCCGG GGCCGGGGGA
CCCCGTGACG GGGAGCCGTG TTGA
 
Protein sequence
MTRPTRATGA GEGTGVTRVL VADDQAMVRG SFRVLVDHTP GLSAVGEAAD GAEAVELARR 
ERPDVVLMDI RMPGLDGIGA TRRICADPAT AGVRVLILTT FDLDEYVYAA LRAGAAGFLL
KDTPPSRVLD AITVVAAGDA LLAPSVTRRL ISEFARLPEP GRPPARALDG VTDREVEVLG
LIARGLSNTE LAEHLHLSLA TVKTHIGRLR AKLGARDRAQ LVITAYETGL VGDRRPGAGG
PRDGEPC