Gene Ndas_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2051 
Symbol 
ID9245901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2473020 
End bp2474054 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003679983 
Protein GI297561009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0974748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAG GATCCTCGCA CCGCGTGGCC CTCGTCGTGG ACGAGGGCTC CAATCCCTTC 
GAGATGAGCG TGGCCACAGA GCTGTTCGGG CTGCGCCGCC CCGAGATCGA CCGCCCCTGG
TACGACCTGA CGGTGTGCGC GGCCGTGCCC GAGGTGCGCG TGCACCGGGG CATGTTCACC
CTCGGCGGCC TGGCCGGGCT GGAGGCGGTC GCGAAGGCCG ACACCGTCAT CGTGCCCAAC
CGCCCCGACC CCGAGGTGCC GCCCTCCCCG GAGGTGGTGG AGGCCGTGCG CGCGGCGGAC
CGGCGCGGCG CCCGTCTGGT GAGCTTCTGC AGCGGCGCGT TCACCCTGGC GGCGGCCGGG
GTCCTGGACG GCCGCCGGGC CGCCACGCAC TGGCGGTTCG AGGAACTGTT CGCCCGGACC
TACCCCCGCG TCCGGCTGGA GCGGGACGTG CTGTTCGTGG ACGAGGGCCG TGTGCTCACC
GCGGCGGGCA GCGCCGCCGC CCTGGACCTG GGGTTGCACC TGATCCGCCG CGACCACGGG
GAGGGGGTCG CCAACACCGT CAGCAGACGG CTGGTGTTCA CCGCCCACCG CGAGGGCGGG
CAGCGCCAGT TCGTGCCCAG GCCCGTCCCC GAGGCAGCCG ACACCTCCCT GTCCCCGCTC
CTGGACTGGG CGCGCGAGCG CCTGGACTCC CCTCTCACCG TCGCCGGCCT GGCCGCCCGG
GCGTCGGTCA GCCCCGCGAC CCTGCACCGC CGTTTCCGGG CCGAGCTGGG CACGACCCCG
CTGGCCTGGC TGCGCGCCGA GCGGGTGCTG CTGGCCTGCC GCCTGATCGA GGCGGGCGGG
ATGGGGCTGG AGACGGTCGC CCGCGCCAGC GGCCTGGGCA GCACCGCCAA CCTGCGCGCG
AGCGTGCGCG CCCACACCGG GGTCAGCCCC TCCGCCTACC GGGAACGCTT CGGGCCGAGG
CAGCTGGCTG GGACTTCAGG CCCTCCGGTC CTTCCCTCAC CGGACGCCGA ACGCGTAGCC
TCCGGGCATG TCTGA
 
Protein sequence
MPQGSSHRVA LVVDEGSNPF EMSVATELFG LRRPEIDRPW YDLTVCAAVP EVRVHRGMFT 
LGGLAGLEAV AKADTVIVPN RPDPEVPPSP EVVEAVRAAD RRGARLVSFC SGAFTLAAAG
VLDGRRAATH WRFEELFART YPRVRLERDV LFVDEGRVLT AAGSAAALDL GLHLIRRDHG
EGVANTVSRR LVFTAHREGG QRQFVPRPVP EAADTSLSPL LDWARERLDS PLTVAGLAAR
ASVSPATLHR RFRAELGTTP LAWLRAERVL LACRLIEAGG MGLETVARAS GLGSTANLRA
SVRAHTGVSP SAYRERFGPR QLAGTSGPPV LPSPDAERVA SGHV