Gene Ndas_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2028 
Symbol 
ID9245878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2448431 
End bp2449015 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003679960 
Protein GI297560986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.165285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG AGTTCGACGC GGTCCTGAGC GCGGTCGGCC CCCGGCTGCG CGCGCTGAGG 
CACCGCCACG GGATCACCCT GACCGCACTG TCCGAGACCA CCGGTATCGC GGTCAGCACC
TTGTCGCGGC TGGAGTCGGG ACAGCGCAGA CCGGGCCTGG AACTGCTGCT GCCCCTGGCC
AAGGCCTACA ACGTGCCGCT CGACGAACTC GTCGGGGCTC CGGCCAACGG CGATCCACGG
GTCTACCCGC GGCCGACCGT GCGCAACGGC ATGACCGTCA TCCCGCTGTC CCGCAACCCC
GGCGGGCTCC AGGCGTTCAA GCAGGTCCTC CCGGCCGGTC CCGACGACCT GGAACCCGAT
CCCCGCTCGC ACGAGGGCTA CCACTGGCTG TACGTGCTCA GCGGACGGCT GCGCCTGGTG
CTGGGAGACC AGGACATCGT CCTCACCGCG GGCGAGGTCG CCGAGTTCGA CACCCATCTG
CCGCACTGGT TCGGCAACGC CGAGCCCCGG CCGGTCGAGT TCCTGAGCAT CCTCGGCCCG
CAGGGCGAGC GTTTCCACAT CAGGGCCCGT TACCAGCCCT CATGA
 
Protein sequence
MDDEFDAVLS AVGPRLRALR HRHGITLTAL SETTGIAVST LSRLESGQRR PGLELLLPLA 
KAYNVPLDEL VGAPANGDPR VYPRPTVRNG MTVIPLSRNP GGLQAFKQVL PAGPDDLEPD
PRSHEGYHWL YVLSGRLRLV LGDQDIVLTA GEVAEFDTHL PHWFGNAEPR PVEFLSILGP
QGERFHIRAR YQPS