Gene Ndas_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2007 
Symbol 
ID9245857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2427006 
End bp2427758 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content76% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003679939 
Protein GI297560965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.702052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG TCCTCGTCAC CGGCGGTACC GGCACCCTGG GACGGCCCGT CGTGGAACGC 
CTGCGCCGGG CCGGGCACCA GGTGCGCAGC CTGAGCCGCC ACCCCGATCC GGAGGACCCC
GCGTCCTTCG CCGTGGACCT GCGCCGGGGC ACCGGGCTGT CCGACGCGGT CCAGGGCGTG
GACACCGTCG TGCACTGCGC CAGCACGCCC TCGGGCGGCG ACATCGAGGC GGCCACCCAC
CTGATCCGCG CGGTCCGCGA GGCGGGTGTG GCGCACCTGG TCTACGTCTC CATCGTCGGC
GTGGACCGGG TTCCGCTGGG CTACTACGGG ACCAAGCACA CCGTGGAGAG CGCGCTGGCG
GCCTCCGGTC TGGGGTGGAC GGTGCTGCGC GCCACCCAGT TCCACGACCT GGTGCGCAGG
CTGTGCGCGG GCGCGGCCCG CCTGCCCCTC ATGCCCGTCC CCGACGTGGA CGTGCAGCCC
GTGGCGGTCG AGGAGGTCGC CTCCCGCCTG GCCCACCTGG CCGACCGTCC TCCGGCCGGG
CGCGTGGCGG ACATGGGCGG CCCGCGCGTG GAGTCCTTCC GCGACCTGGC CGCGGCCTAC
CAGCGCTGGG CGGGGACGGA CCTGCGGACG GTGCCCGTAC GCCTGCCGGG CGCCGTCTTC
GCCGCCTACC GCGCCGGAGG CCACCTGGCC CCGGACCGGG CGGTGGGCAA GGTGACCTTC
GCGGAGTTCC TGGCCGACCG GAACCCGGAG TGA
 
Protein sequence
MKTVLVTGGT GTLGRPVVER LRRAGHQVRS LSRHPDPEDP ASFAVDLRRG TGLSDAVQGV 
DTVVHCASTP SGGDIEAATH LIRAVREAGV AHLVYVSIVG VDRVPLGYYG TKHTVESALA
ASGLGWTVLR ATQFHDLVRR LCAGAARLPL MPVPDVDVQP VAVEEVASRL AHLADRPPAG
RVADMGGPRV ESFRDLAAAY QRWAGTDLRT VPVRLPGAVF AAYRAGGHLA PDRAVGKVTF
AEFLADRNPE