Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2007 |
Symbol | |
ID | 9245857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2427006 |
End bp | 2427758 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003679939 |
Protein GI | 297560965 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.702052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACAG TCCTCGTCAC CGGCGGTACC GGCACCCTGG GACGGCCCGT CGTGGAACGC CTGCGCCGGG CCGGGCACCA GGTGCGCAGC CTGAGCCGCC ACCCCGATCC GGAGGACCCC GCGTCCTTCG CCGTGGACCT GCGCCGGGGC ACCGGGCTGT CCGACGCGGT CCAGGGCGTG GACACCGTCG TGCACTGCGC CAGCACGCCC TCGGGCGGCG ACATCGAGGC GGCCACCCAC CTGATCCGCG CGGTCCGCGA GGCGGGTGTG GCGCACCTGG TCTACGTCTC CATCGTCGGC GTGGACCGGG TTCCGCTGGG CTACTACGGG ACCAAGCACA CCGTGGAGAG CGCGCTGGCG GCCTCCGGTC TGGGGTGGAC GGTGCTGCGC GCCACCCAGT TCCACGACCT GGTGCGCAGG CTGTGCGCGG GCGCGGCCCG CCTGCCCCTC ATGCCCGTCC CCGACGTGGA CGTGCAGCCC GTGGCGGTCG AGGAGGTCGC CTCCCGCCTG GCCCACCTGG CCGACCGTCC TCCGGCCGGG CGCGTGGCGG ACATGGGCGG CCCGCGCGTG GAGTCCTTCC GCGACCTGGC CGCGGCCTAC CAGCGCTGGG CGGGGACGGA CCTGCGGACG GTGCCCGTAC GCCTGCCGGG CGCCGTCTTC GCCGCCTACC GCGCCGGAGG CCACCTGGCC CCGGACCGGG CGGTGGGCAA GGTGACCTTC GCGGAGTTCC TGGCCGACCG GAACCCGGAG TGA
|
Protein sequence | MKTVLVTGGT GTLGRPVVER LRRAGHQVRS LSRHPDPEDP ASFAVDLRRG TGLSDAVQGV DTVVHCASTP SGGDIEAATH LIRAVREAGV AHLVYVSIVG VDRVPLGYYG TKHTVESALA ASGLGWTVLR ATQFHDLVRR LCAGAARLPL MPVPDVDVQP VAVEEVASRL AHLADRPPAG RVADMGGPRV ESFRDLAAAY QRWAGTDLRT VPVRLPGAVF AAYRAGGHLA PDRAVGKVTF AEFLADRNPE
|
| |