Gene Ndas_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1972 
Symbol 
ID9245822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2395844 
End bp2396497 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003679905 
Protein GI297560931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.94288e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.32591e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAGCGTGC GGGTGGTGGT GGCCGATGAC CAGGCGCTGG TGCGGATGGG GTTGCGGGTG 
CTGTTGGAGG GGGAAGCGGA CCTGGAGTTG GTGGGTGAGG CCGGTGATGG TGGGCAGGCG
GTGGAGCTGG TGCGTCGGCT GCGTCCGGAT GTGGTGTTGA TGGACGTGCG GATGCCGGTG
GTGGACGGGT TGGAGGCGCT GCGGCGGATC GCGGGTGAGG AGGCGCTGGC GCACACCCGG
GTGGTGGTGT TGACGACGTT CGAACTGGAC GAGTACGTGT TCGAGGCGTT GCGTGCGGGG
GCGTCGGGGT TCTTGATCAA GGACAGCGAC CCGCAGGAGA TGTTGGCCGC GGTGCGGGCG
GCGGCGCGGG GTGAGGCGTT GTTGTCGCCG TCGGTGACGC GGCGGGTGGT GGCGGCGTTC
GTCTCGCGTG AGCCGGGCGG GGGCCGGGTG CCGCGGTTGG AGGTGTTGAC CGAGCGGGAG
CGTGAGGTGG TGGGGCTGGT GGGTGAGGGT TTGAGCAACG AGGAGATCGC GGCCCGGTTG
GTGGTCTCCC CGGCGACGGC GCGCACGCAC GTGAGCCGGG CGATGGTCAA GCTCGGGGCG
CGGGACCGGG CGCAGCTGGT GGTGTTCGCT TTTCGGGCCG GGCTGGTGCG CTGA
 
Protein sequence
MSVRVVVADD QALVRMGLRV LLEGEADLEL VGEAGDGGQA VELVRRLRPD VVLMDVRMPV 
VDGLEALRRI AGEEALAHTR VVVLTTFELD EYVFEALRAG ASGFLIKDSD PQEMLAAVRA
AARGEALLSP SVTRRVVAAF VSREPGGGRV PRLEVLTERE REVVGLVGEG LSNEEIAARL
VVSPATARTH VSRAMVKLGA RDRAQLVVFA FRAGLVR