| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1954 |
|---|
| Symbol | |
|---|
| ID | 9245804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2377887 |
|---|
| End bp | 2378948 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ATPase associated with various cellular activities AAA_3 |
|---|
| Protein accession | YP_003679887 |
|---|
| Protein GI | 297560913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.25859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000487969 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGA GCGGAAACGG CTCAGCGCCC TCCGCGGGCC CGGACAGCGC TCCGGGTGAA
CCGACCCGGC TGCTGCGCGC CGCGCTGCAC GAGGTGTCCA GGGTGATCGT GGGCCAGGAG
CGCATGGTGG AGCGCTCCCT GATCGCCCTG GTCGCGGGAG GGCACTGCCT GATCGAGGGC
GTACCCGGAA TCGCCAAGAC CCTGGCGGTG TCCACCCTGG CCAAGGTCAC CGGGGGTTCG
TTCGCCCGTG TGCAGTTCAC CCCGGACCTG GTGCCCTCCG ACATCGTCGG CACGCGCATC
TACCATCCCT CCACCGAGCA GTTCGACGTG GAGCTGGGGC CGGTCTTCGC CAACTTCGTG
CTCGCCGACG AGATCAACCG GGCCCCGGCC AAGGTGCAGT CGGCCCTGTT GGAGGTCATG
GCCGAGCGGC AGGTGTCCCT CGGCGGGACC ACCCACCCGC TCCCCTCCCC GTTCATCGTC
ATCGCCACAC AGAACCCGGT GGAGTCCGAG GGCGTGTACC CGCTGCCCGA GGCCCAGCGC
GACCGGTTCC TGATGAAGGT CAACGTCCGC CATCCGCGCG CGCACGAGGA GATGGAGATC
CTGCGCCGGA TGTCGACCAC CCCGCCCACC GCGCACCAGG TGCTCGACCC CGTCACCCTG
AGCGAGCTGC AGTCCGACGC CCAGCGCGTC CACGTCCACC AGCTCATCGC CGACTACGTG
GTGCGGCTGG TCATGGCCAC GCGCGAGCCG GAGAACCACC AGATGCCGGA CCTGCGCCAG
GTGCTGGAGA TGGGGGCCAG CCCCCGTGCC ACCCTGGGGC TGGTCTCGGC CGCCCGGGCC
CTGGCCCTGC TGCGCGGGCG CGACTACGTG CTCCCCGACG ACGTGCGGGT GCTCGCCCAC
GACGTCATCG CCCACCGCCT GGTGCTGACC TTCGACGCCC TGGCCGACGG GATCACCGCC
GAACAGGTGG TGGACCGCAT CCTGTCGACC GTGCTGGCGC CGCGGGTGAT CTGGGACGAG
CCGCCCAGCG GGGAGACCGC CTCCTTCGCC TCCGCGAGGT GA
|
|---|
| Protein sequence | MAESGNGSAP SAGPDSAPGE PTRLLRAALH EVSRVIVGQE RMVERSLIAL VAGGHCLIEG
VPGIAKTLAV STLAKVTGGS FARVQFTPDL VPSDIVGTRI YHPSTEQFDV ELGPVFANFV
LADEINRAPA KVQSALLEVM AERQVSLGGT THPLPSPFIV IATQNPVESE GVYPLPEAQR
DRFLMKVNVR HPRAHEEMEI LRRMSTTPPT AHQVLDPVTL SELQSDAQRV HVHQLIADYV
VRLVMATREP ENHQMPDLRQ VLEMGASPRA TLGLVSAARA LALLRGRDYV LPDDVRVLAH
DVIAHRLVLT FDALADGITA EQVVDRILST VLAPRVIWDE PPSGETASFA SAR
|
|---|
| |