Gene Ndas_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1920 
Symbol 
ID9245770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2339842 
End bp2340597 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003679853 
Protein GI297560879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.893367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.273767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAGAT CAGTTCTGGT GACCGGCGGG ACCCGGGGCA TCGGGCTCGG TATCGCTAAG 
GGGTTCGCCG AGGCCGGGGA CCGGGTGGTG ATCGTCGGGC GCGACAAGGC CAGGGCGCGC
GAGGCCGCCC GGGGCGTCCC GGGGGCGGAG TGGGTGGTCG GCGACGTGGC CGGGGCCGAC
GACTGCGAAC GCGTCGTGGA GCAGGCCGTG CGGCGCACCG GCGGCCTGGA CGTGGTCTGC
GCCAACGCCG GGATCTTCCC CTCGTCCCCG CTGGTGTCGA TGGACCCCGG CGAACTCGAC
CGGGTCGTGG ACACCAACGT GAAGGGCACC GTGCTGACGG TGCGCGCCGC GGTGGAGGCC
CTGACCGCCT CCGGAAGGGG GCGGGTGGTC ATCACCTCCT CCATCACCGG ACCGCTGACC
GGATACGCGG GCTGGTCCCA CTACGGAGCC ACCAAGGCCG CCCAGCTGGG GTTCATGCGC
AGCGCCGCCC TGGAGCTCGC GCCCCGGGGC ATCACCGTCA ACGCGGTGCT GCCGAGGAAC
GTGCGCACCG AGGGCCTGGA GGAGTTGGGG CCGGACTACC TGGAGCGCAT GCGCGCGGCG
ATCCCGCTGG GACGCATCGG CGAGGTGGAG GACATCGCCG CGGCCTGCCT GTTCCTGGCC
GGTCCCGGAG CCTCCTTCAT CACCGGGCAG ACCATCGTGG TCGACGGGGG CCAGGTGCTG
CCCGAGGACG GCCGGGCCTT CGGCGGTTCG GAATGA
 
Protein sequence
MDRSVLVTGG TRGIGLGIAK GFAEAGDRVV IVGRDKARAR EAARGVPGAE WVVGDVAGAD 
DCERVVEQAV RRTGGLDVVC ANAGIFPSSP LVSMDPGELD RVVDTNVKGT VLTVRAAVEA
LTASGRGRVV ITSSITGPLT GYAGWSHYGA TKAAQLGFMR SAALELAPRG ITVNAVLPRN
VRTEGLEELG PDYLERMRAA IPLGRIGEVE DIAAACLFLA GPGASFITGQ TIVVDGGQVL
PEDGRAFGGS E