Gene Ndas_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1906 
Symbol 
ID9245756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2326775 
End bp2327356 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003679840 
Protein GI297560866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.812491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA GTGCCGATCT CACCGGCCGG GCCCGCATCC GGATGTCCGC GCTGCGCCTG 
TTCGCCGAAC ACGGCTTCTC CAGCACCTCG CTCCGCGCCA TCGCGGCCGA CGCCGGGGTC
TCTCACGCCT TGGTCCGGCA CCACTTCGGT TCCAAGGAGA AACTGCGCGA GGCCGTGGAC
GAGGACGTCC TGGACGCCTT CGACACGGTC CTCTCCGACA TCGGCGAGCG GGAAGGCGCA
CCGGAGAGCC TCGCTGCTTT CGGCGAGGCC AGCGCCAGGC TGTTCGGAAC GGACGCGATC
CGGCGTGAAT ACCTCCGCCG CGCCTTGGCA GAAGGCAGCG ACCTGAGCGC CCGCCTCTTC
GCCCGTCTGC TGGAGGGGGT ACGGGTACGG CTCTCGACGA TGGGCGGCAC GGATGAGCGG
TGGGCCCCCT ACCAGGTACT CTTCCTCGTC CTGGGCCCCA TGCTCCTGGA ACCGGTGATG
CGACCGGGCC TGGACACACC GGTCTTCGAC CCCTCGGTGG TCGCCGAACG CAGCGCGGCC
AACCAGCGGC TGCTCACCCA CGGGATGTTC GCCAAGGACT GA
 
Protein sequence
MTHSADLTGR ARIRMSALRL FAEHGFSSTS LRAIAADAGV SHALVRHHFG SKEKLREAVD 
EDVLDAFDTV LSDIGEREGA PESLAAFGEA SARLFGTDAI RREYLRRALA EGSDLSARLF
ARLLEGVRVR LSTMGGTDER WAPYQVLFLV LGPMLLEPVM RPGLDTPVFD PSVVAERSAA
NQRLLTHGMF AKD