Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1906 |
Symbol | |
ID | 9245756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2326775 |
End bp | 2327356 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003679840 |
Protein GI | 297560866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.812491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCACA GTGCCGATCT CACCGGCCGG GCCCGCATCC GGATGTCCGC GCTGCGCCTG TTCGCCGAAC ACGGCTTCTC CAGCACCTCG CTCCGCGCCA TCGCGGCCGA CGCCGGGGTC TCTCACGCCT TGGTCCGGCA CCACTTCGGT TCCAAGGAGA AACTGCGCGA GGCCGTGGAC GAGGACGTCC TGGACGCCTT CGACACGGTC CTCTCCGACA TCGGCGAGCG GGAAGGCGCA CCGGAGAGCC TCGCTGCTTT CGGCGAGGCC AGCGCCAGGC TGTTCGGAAC GGACGCGATC CGGCGTGAAT ACCTCCGCCG CGCCTTGGCA GAAGGCAGCG ACCTGAGCGC CCGCCTCTTC GCCCGTCTGC TGGAGGGGGT ACGGGTACGG CTCTCGACGA TGGGCGGCAC GGATGAGCGG TGGGCCCCCT ACCAGGTACT CTTCCTCGTC CTGGGCCCCA TGCTCCTGGA ACCGGTGATG CGACCGGGCC TGGACACACC GGTCTTCGAC CCCTCGGTGG TCGCCGAACG CAGCGCGGCC AACCAGCGGC TGCTCACCCA CGGGATGTTC GCCAAGGACT GA
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Protein sequence | MTHSADLTGR ARIRMSALRL FAEHGFSSTS LRAIAADAGV SHALVRHHFG SKEKLREAVD EDVLDAFDTV LSDIGEREGA PESLAAFGEA SARLFGTDAI RREYLRRALA EGSDLSARLF ARLLEGVRVR LSTMGGTDER WAPYQVLFLV LGPMLLEPVM RPGLDTPVFD PSVVAERSAA NQRLLTHGMF AKD
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