| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1904 |
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| Symbol | |
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| ID | 9245754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 2322483 |
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| End bp | 2324519 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003679838 |
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| Protein GI | 297560864 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.674112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAA AACCACATAA AAACAAAGAG CAAACGAGCC GTCGCAGGAA GGAACACAAA
GACGAGAAAG GCAAGGACCG GGCCTCGGCG CCGCGGAGCC GGACGGGCCA CACCGCGCTC
GGGAGCCTGG ACTACCAGCA CCCCACGTAT CCCCACGACA CACACCCGGT CCTCGTCCCG
GGCATCTCGA TCGACGACCA GCGCCGCAGC TACCGGGTCG ACTGGCTCGT CTTCGCGGTC
GCCGGATCGC TGACGGTCGC CTTCGTCGTC TGGGGCATCT GGTCGCCGGG AAGCGTCGCC
GCGGTCGCCG AGACGGCGTT CTACTGGTCG ACCGACAACC TCGGCTGGAT GTTCAACGTC
GTGGCCATCG TCGTGCTCGT CTCCACCGTG GGCATAGCGT TCTCGCCCTA CGGGAGGATC
CCGCTGGGCA AGGACGGCGA GCGGCCCGAG TTCAGCACGT TCTCCTGGAC GGCCATGCTG
TTCGCCGCCG GGCTGGGTGT GGCGGTCCTG TTCTGGGGGC CCTCGGAGCC GCTCGGCTAC
TTCATCTCAC CGCCTCCGCT GACGAACGAG CCGGAGTCGG TCGAGGCCAT GCACACGGCG
CTCGCCCAGA TGTACTACCA CTGGGGCTTC CACGCGTGGG CCGTCTACGC GCTGGTCGGC
GGGGCCGTCG CCTACGCCGC CTACCGCCGC GGCCGTCCCC TGCTCATGTC CTCGATCTTC
CGCGCCCTGT TCGGCCGACG GCTCACCGAG GGTTTCGCCG GAAAGCTCGT CGACATCTTC
GCGATCATCG CCACGCTCTT CGGCACCGCC GCCGCCCTCG GTATCGCGGC GATGCAGATC
GGCTCCGGCG TCAGCATCGT GTCGGGCGCC GGGGACCTCA CGAACAACAC CCTGGTCGTC
ATCATCGCGG TCCTGACCGT CGGCTTCGTC GTCTCGGCGG TCTCGGGCGT CGCACGGGGC
ATCCGGCTCC TGTCGAACGT GAACATCGTG CTCACGATCG GCATCGTCGC GGTCTTCCTC
TTCCTCGGCC CCACACTGTT CCTCCTGAAC CTGCTGCCCT CGGCGGTCAT GGAGTACTTC
GGCTCCCTGT TCGACATGAT GGGCCGATCG CTCTCGTGGG GTCCCGAGAC GCAGGAGTTC
CAGTCGCTGT GGACCGTCTA CTACTGGGCG TGGTGGATCT CCTGGTCGCC CTTCGTGGGC
ATCTTCCTCG CGCGCATCTC CCGCGGCCGC ACCATCCGCC AGTTCACCCT CGGCACGATC
ATCATCCCGT CCTCGCTGCT CTTCGTCGCC TACGGGGTGA TGGGCGGAAC CTCCATCTGG
ATGTACCGGG AGGGCGCCCC CGGTCTCACC GAGGGCATGC CCGCGCCCGA GGTGCTCTTC
GCCCTCATCG ACAACCTGCC GTACGTGGAG TGGCTGCCCT TCGTCGTGAT CGTGGTGCTC
GCGATCTTCT TCATCACCGC CGCCGACTCC GCGTCGGTGG TGATGGGCAT GCTCACCACG
CAGGGGGACC AGAACCCGCG CCTGTGGGTG GTCGTCTTCT GGGGCCTGGT CATGTCGGGG
ATCGCGATCG TGATGCTGCT TCTGGGCGAC GCGACGGCGT TGACGGGCCT GCAGCAGCTG
GTGATCGTCA CGGCGGTGCC CTTCGCGCTC GTACTGGTCC TCGCCGTCGT CGCGTGGTTC
AGGGAGCTGC GCACCGATCC CCTCACCCTG CGCATGCACT ACATCGACAC GGCGATGGAC
AACGCCGTGA CGGAGGGGGT GGACCGCTAC GGCGACGACT TCTCCCTGAA GGTCGTGGAA
TCGCGGCCCG GGGACGGAGC CGGGGCGGGC ATCGACTCCA CCGACGAGAG CTACACGGAG
TGGTACCAGC GCACCAATGA GGAGGGCGAA CCGGTCGGCT TCGACTTCGG GACCGGGGAG
TGGGCCGACG GCTACGATCC GGACACCGGT GAGACCTCGG AGACCGCCCC CGAAGGGGCC
GTGGTGGCAC GGGAAGACCG CGTCGAGGTG TCGGAGACCG GGACCGAGGA ACGCTGA
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| Protein sequence | MPEKPHKNKE QTSRRRKEHK DEKGKDRASA PRSRTGHTAL GSLDYQHPTY PHDTHPVLVP
GISIDDQRRS YRVDWLVFAV AGSLTVAFVV WGIWSPGSVA AVAETAFYWS TDNLGWMFNV
VAIVVLVSTV GIAFSPYGRI PLGKDGERPE FSTFSWTAML FAAGLGVAVL FWGPSEPLGY
FISPPPLTNE PESVEAMHTA LAQMYYHWGF HAWAVYALVG GAVAYAAYRR GRPLLMSSIF
RALFGRRLTE GFAGKLVDIF AIIATLFGTA AALGIAAMQI GSGVSIVSGA GDLTNNTLVV
IIAVLTVGFV VSAVSGVARG IRLLSNVNIV LTIGIVAVFL FLGPTLFLLN LLPSAVMEYF
GSLFDMMGRS LSWGPETQEF QSLWTVYYWA WWISWSPFVG IFLARISRGR TIRQFTLGTI
IIPSSLLFVA YGVMGGTSIW MYREGAPGLT EGMPAPEVLF ALIDNLPYVE WLPFVVIVVL
AIFFITAADS ASVVMGMLTT QGDQNPRLWV VVFWGLVMSG IAIVMLLLGD ATALTGLQQL
VIVTAVPFAL VLVLAVVAWF RELRTDPLTL RMHYIDTAMD NAVTEGVDRY GDDFSLKVVE
SRPGDGAGAG IDSTDESYTE WYQRTNEEGE PVGFDFGTGE WADGYDPDTG ETSETAPEGA
VVAREDRVEV SETGTEER
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