Gene Ndas_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1808 
Symbol 
ID9245658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2214023 
End bp2214628 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content73% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003679742 
Protein GI297560768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.207018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA TCCTCGTCGC CGACGACGAA CACCTCATCC GCGACGCCGT CGCCGGACTG 
CTCGACCTGG AGGAGGACTT CGAGGTCGTC GCCCAGGCGG CCTCCGGCGA CGAGGCGCTG
GCCATGGCCC TCAAACTCCG CCCGGACGTG GCCCTGCTCG ACCTGCAACT GCCCGGCCCC
GACGGCATCG AGATCGCCCG CAGGCTCGCC ACCGAGCTGC CCGGATGCCG GTGCGTCATC
GTCACCTCCC ACGGCCGCCC CGGCTACCTG AAGTCGGCGC TCGCGGCGGG TGTGAGCGGC
TTCCTGCCCA AGACCGTGTC CTCGCGCACC TTCGCCGAGG TCGTGCGCAA GGTCGCGGCC
GGAGGCCGCT ACGTCGATCC CGAACTCGCG GCCGAGGCGA TCAGCGCGGG CGACTCCCCG
CTCAGCCCGC GCGAGGCCGA CGTGCTGGCC CTGGCCCGCG ACGGCGCACC CGTGGAGGAG
ATCGCCCGGC GCGTCTCGCT CTCGCGGGGG ACGGTGCGCA ACTACCTCGC GGCCGCCGTC
GCCAAGCTCG ACGCCGCCAA CCGGCACGAG GCCGCGCACA TCGCCGCCGA ACACGGCTGG
ATCTGA
 
Protein sequence
MTRILVADDE HLIRDAVAGL LDLEEDFEVV AQAASGDEAL AMALKLRPDV ALLDLQLPGP 
DGIEIARRLA TELPGCRCVI VTSHGRPGYL KSALAAGVSG FLPKTVSSRT FAEVVRKVAA
GGRYVDPELA AEAISAGDSP LSPREADVLA LARDGAPVEE IARRVSLSRG TVRNYLAAAV
AKLDAANRHE AAHIAAEHGW I