| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1796 |
|---|
| Symbol | |
|---|
| ID | 9245646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2195399 |
|---|
| End bp | 2197942 |
|---|
| Gene Length | 2544 bp |
|---|
| Protein Length | 847 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | putative ATP/GTP binding protein |
|---|
| Protein accession | YP_003679730 |
|---|
| Protein GI | 297560756 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0346132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.567176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGTA CGCGGTGGGT CCGGGCGGGT GCCGCGGCGA CCCTGTTCCT GGGCGCGGCG
GCCGTCCTCC TGTGGCTCGT CGGCGGCCCC GACCCGCTCC GGGCACGGGC CGCCGCCGGT
GTCGGCGCCG CCGCCGTGCT GACGCTCGCC GTGACCGCGC TCGCCCGGAC GGGGCGGGCC
GTGCCGCGCC CGACGGCACC GGCGACCGGC GAGGACGCGG CCAACACCCT CACCGGGCGC
GTGAGCGGCG GCACCGTGAT CCAGGGGCGC ACCCTCACCG TGCACCAGCC GAGGCACCAC
ACGGTCATCG ACACGCAGAT CGTCCACGCG CCGACCGCCG GGCCCGACTG GCCCGTCGTC
GTCGGGGTCC TGCCCAACGA GGCCGACCAC TTCCAGGAAC GGGACCTGAC CGGTCGGATG
GACCACGCGG CCCGGGGCCG CCCCGGGGCC GTGCCGGGCC TGGTCCTGAC GGGGATGGGC
GGGGCGGGCA AGACCCAGCT GGCCGCCCAC CACGCCCGCG CCCTCCTGGC GAAGGAGCGG
GTCGACCTGG TGGTGTGGGT ACCCGCGGCC GAGCGGTCCG CCATCACGCA GACCTACGCC
GACGCCGCCC GCCGGGTCGT CTCCGGCCAC GTGGACGAGG ACCCCGAACG GGCGTCCCAC
CAGTTCCTCG CCTGGCTCCA GACCACCGAC CGGCGCTGGC TGGTCGTGCT GGACAACCTC
GACGTCCCCC GGCACGCGAG CGGCCTGTGG CCGCCCAACG CCACCCCCGC CGCCCACGCA
CCGGGGCCGC AGGGCCGCCT CGTGGTCACC ACCCGCCGCA CCGACACCGC ACTGGCCGGT
CGGGGCCGCA CGTTCGTCGG CGTCGGCACC TACGCGCCGC CGGAGTCCCT CGCCTACCTG
GCCACCGCGC TCCGCGACCT GCCCCGGGTA CCCGGCGGAG CGGAGCTGAG GGCCCTGGCC
GACGAACTGG GCCACCTGCC GCTCGCCCTG TCCCACGCCG CCGCCTACGT CCGCGACCGC
AGGGACGGCA TGACCTGCGA CTCCTACCGC GCCCTGCTCC GGGACCGGCG GCGCACCCTG
GCGAGGGTGT TCCCGGAGGG GGAGAGCCTG CCCGACGACG GATCCCGGAC GGTGGCCGCC
ACCTGGGCGG TCTCCGTCGA GCACGCCGAC ACCCTGGCCC CCGAAGGGCT GGCGCGGCCG
ATGATGCGGC TGGTCAGCGT GCTGGACCCC ACCGGCATCC CCGCCGCGGT CCTGACCTCG
GAGCCCGTTC TGGACCACCT CCACCGCGCA CGCCCCGACG GCCCGCGGCC CACCGCCCAG
GACGCCGACG ACGCCCTGTC CGCGCTGGCC AGACTGCACC TGGTCACCCG CACGGGGTTC
GGACACGACG CCGTGGTGGG CGCGCACCGC CTCGTGCAGC GCGCCACCCG GGACCACCCC
GCGACCGCCG TCGACCGCGA CACCGTGCAC ACGGCCGCCG AGGCGCTCCT GTCGGTCTGG
CCCGTGCGCG TGCACGCCAG CCCCCTGGGA CAGCGGCTGC GCGCCAACGC CGCCGCGCTG
GACGAGCACG GCGGCGAGTG GCTGTGGGGG GACGGCGCGC ACCGGGTGCT GTTCGCGCTC
GGGAGCAGCT TCGGCCGTTC CGGCGCGCTC TCCCAGGCCA CGGCCCGGTT CGAGTCCCTG
GTGGAGGCCG CCGACCTCCG GCTGGGCCCC CGGCACCCGG ACTCGCTGGC GGCCCGCCAC
GAACTCGTCC TGTGGCGCGG CATGGCGGGC GAGGCCACCG ACGCCGCCCG GGGCTTCCGG
GACCTGGCCG AGGACATGAC GCGGGCCCTG GGCGCGGACC ACCCCCAGAC CCTGGTCACC
CGGGTCCAGG CGGCGCGGTG GCGCGGACGG GCGGGTGACT CCCGAGGCGC GTGCGAGGCG
CTGGAGGACC TTCTGCCGGG CCTGCTGCGC CGCCTGGGCC CCGACCACCC CGAGGCGCTC
GCCGCGCGCG GCCACCTGGC CTCCCTGAAG GGTCGGGCGG GGGACGCCCG GGCCGCCTTC
GAGACCTACC GGTCGCTGAT CGGGGACCAC CGGCGCGTGC TGGGCCCCGA CCACCCGAGC
ACCATGGTCA TCCGCGGCCA GACCGCCCGG TGGCGGGGGA GGGCGGGTGA CGTCGACGGG
GCCATCGCGG GCTTCGAGGC ACTGCTCCCC GACCAGCTGC GCCTCCTGGG GCCCGGCCAC
CCCGACACCC TCAGCACCCG CGGCCAGATC GCCGCCTGGC GGGGCGTCCG AGGAGACCAC
GCGGGCGCGC TGGACGGGCT CGGCGAACTC CTGACGGACC AGGTCCGTTA TCTGGGCGCC
GACCACCCCC ACGTCCTCAC CACCCGCCAC AGCCTGGCCC GTTTCCGCGG TGAGGCGGGC
GATCCCGTGC GGGCGGCCGA GGCGATGGAG GCCCTTCTGC CCGACCAGCT GCGGATCCTG
GGGCCCGACC ACCCCAGGAC CCGGGAGATC AGGGCCGACC TGGAGCTGTG GCACCGGAGG
GCGCGGGCCG GCGGGGGAGG GTGA
|
|---|
| Protein sequence | MTRTRWVRAG AAATLFLGAA AVLLWLVGGP DPLRARAAAG VGAAAVLTLA VTALARTGRA
VPRPTAPATG EDAANTLTGR VSGGTVIQGR TLTVHQPRHH TVIDTQIVHA PTAGPDWPVV
VGVLPNEADH FQERDLTGRM DHAARGRPGA VPGLVLTGMG GAGKTQLAAH HARALLAKER
VDLVVWVPAA ERSAITQTYA DAARRVVSGH VDEDPERASH QFLAWLQTTD RRWLVVLDNL
DVPRHASGLW PPNATPAAHA PGPQGRLVVT TRRTDTALAG RGRTFVGVGT YAPPESLAYL
ATALRDLPRV PGGAELRALA DELGHLPLAL SHAAAYVRDR RDGMTCDSYR ALLRDRRRTL
ARVFPEGESL PDDGSRTVAA TWAVSVEHAD TLAPEGLARP MMRLVSVLDP TGIPAAVLTS
EPVLDHLHRA RPDGPRPTAQ DADDALSALA RLHLVTRTGF GHDAVVGAHR LVQRATRDHP
ATAVDRDTVH TAAEALLSVW PVRVHASPLG QRLRANAAAL DEHGGEWLWG DGAHRVLFAL
GSSFGRSGAL SQATARFESL VEAADLRLGP RHPDSLAARH ELVLWRGMAG EATDAARGFR
DLAEDMTRAL GADHPQTLVT RVQAARWRGR AGDSRGACEA LEDLLPGLLR RLGPDHPEAL
AARGHLASLK GRAGDARAAF ETYRSLIGDH RRVLGPDHPS TMVIRGQTAR WRGRAGDVDG
AIAGFEALLP DQLRLLGPGH PDTLSTRGQI AAWRGVRGDH AGALDGLGEL LTDQVRYLGA
DHPHVLTTRH SLARFRGEAG DPVRAAEAME ALLPDQLRIL GPDHPRTREI RADLELWHRR
ARAGGGG
|
|---|
| |