Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1790 |
Symbol | |
ID | 9245640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2188723 |
End bp | 2189397 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003679724 |
Protein GI | 297560750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.121253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.33193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCCCTG TGAACGGCAG GGTGACGAGG TCGGACCGGG TCGCCGCGAC GCGGGAGGCG ATTCTGGCGG CGGCGGAGCG GCTCTTCGCC GAGCACGGAC TGGCCGGTGT CTCCAACCGG CAGATCAGCC AGGAGGCGGG GCAGGGGAAC AACACCGCGG TCAGCTACCA CTTCGGCTCC AGGGAGGGGC TGATCCGCGC GATCGTGCGC AGGCACAACG ACCAGATCGA GGAGCTGCGT CTGCGCATGG TGCTGAGGTT CGACGGGTCC GACCGGGTGA GGGACTGGAT CGCCTGCATG GTGGAACCCC TGGCCCAGCA CCTCGCCGAC CTGGGCACAC CCAGTTGGTA CGGGAGGTTC AGCGCCCAGG CCGTCAGCGA CCCCGCCTAC CGTGCGACCG TGGCCGGCGA GGCCCTCAAC TCCCCCTCCC TGGTCCGGGT GGGGGAGGAA CTGCTCAGGT GCCTTCCCGA CCTGCCGACC GAGGTCCGCG GGGAACGCCG GGACATGGCA CGCCATCTCA TGGTGCACAT GATCGCCGAG CGCGAGCGCG CCCTGGCCGA GGGGGCCGAT ACCCCCAGGG AGTCCTGGCA CCGGGCCGCC GTCGGGCTGA CCGACGCCCT CACCGGCCTC TGGCTCGCCC CCGTCACCGG GTCCGGGGCG CGGGCCGGCG AGTAG
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Protein sequence | MVPVNGRVTR SDRVAATREA ILAAAERLFA EHGLAGVSNR QISQEAGQGN NTAVSYHFGS REGLIRAIVR RHNDQIEELR LRMVLRFDGS DRVRDWIACM VEPLAQHLAD LGTPSWYGRF SAQAVSDPAY RATVAGEALN SPSLVRVGEE LLRCLPDLPT EVRGERRDMA RHLMVHMIAE RERALAEGAD TPRESWHRAA VGLTDALTGL WLAPVTGSGA RAGE
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