Gene Ndas_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1790 
Symbol 
ID9245640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2188723 
End bp2189397 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003679724 
Protein GI297560750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.121253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.33193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCCTG TGAACGGCAG GGTGACGAGG TCGGACCGGG TCGCCGCGAC GCGGGAGGCG 
ATTCTGGCGG CGGCGGAGCG GCTCTTCGCC GAGCACGGAC TGGCCGGTGT CTCCAACCGG
CAGATCAGCC AGGAGGCGGG GCAGGGGAAC AACACCGCGG TCAGCTACCA CTTCGGCTCC
AGGGAGGGGC TGATCCGCGC GATCGTGCGC AGGCACAACG ACCAGATCGA GGAGCTGCGT
CTGCGCATGG TGCTGAGGTT CGACGGGTCC GACCGGGTGA GGGACTGGAT CGCCTGCATG
GTGGAACCCC TGGCCCAGCA CCTCGCCGAC CTGGGCACAC CCAGTTGGTA CGGGAGGTTC
AGCGCCCAGG CCGTCAGCGA CCCCGCCTAC CGTGCGACCG TGGCCGGCGA GGCCCTCAAC
TCCCCCTCCC TGGTCCGGGT GGGGGAGGAA CTGCTCAGGT GCCTTCCCGA CCTGCCGACC
GAGGTCCGCG GGGAACGCCG GGACATGGCA CGCCATCTCA TGGTGCACAT GATCGCCGAG
CGCGAGCGCG CCCTGGCCGA GGGGGCCGAT ACCCCCAGGG AGTCCTGGCA CCGGGCCGCC
GTCGGGCTGA CCGACGCCCT CACCGGCCTC TGGCTCGCCC CCGTCACCGG GTCCGGGGCG
CGGGCCGGCG AGTAG
 
Protein sequence
MVPVNGRVTR SDRVAATREA ILAAAERLFA EHGLAGVSNR QISQEAGQGN NTAVSYHFGS 
REGLIRAIVR RHNDQIEELR LRMVLRFDGS DRVRDWIACM VEPLAQHLAD LGTPSWYGRF
SAQAVSDPAY RATVAGEALN SPSLVRVGEE LLRCLPDLPT EVRGERRDMA RHLMVHMIAE
RERALAEGAD TPRESWHRAA VGLTDALTGL WLAPVTGSGA RAGE