Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1690 |
Symbol | |
ID | 9245540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2063394 |
End bp | 2064311 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003679625 |
Protein GI | 297560651 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.33559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.186529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCACC GCAACCAGAT CCGGGACTTC CTCTCCACCA GACGGGGGAG GATCACCCCC GAGCAGGCGG GACTCGTCGC CTTCGGCGGC AACCGGCGGG TGCCGGGCCT GCGCCGCGAG GAACTCGCCA TGCTCGCCGG GGTGAGCGTG GACTACTACA CCCGCATCGA GCGGGGCAAC CTCAAGGGCG TCTCCGAGAG CGTCCTGCAC GCCCTGGCCG AGGCGCTCCG GCTCGACGAC GCCGAGCGCG CCCACCTGTT CGACCTGGCG CGCACGGCGG GGGAGGCGCC GGGCAGGCCC CGACGCCGGT CGGCGCGCCA GCGCGTGCGG CCCGGCGTGC AGCGGATCCT CGACGCGATG ACCGGCGCAC CGGCGGTGGT GCAGAACGGG CGGCTCGACA TCCTGGCCGC CAACCGGCTC GGCCGCGCCC TGTACGCGCA GGTCCTCGAC ATGTCCGGGC GGCCCGCCAA CTACGCGCGG TTCGCCTTCC TGGACCCCCG CGCGCGGGAC TTCTACCCCG ACTGGGAGCG GGCGGCCAAC GACACCGTCG CCGTCCTGCG CACCGCTGTC GGACGCGACC CCTACGACCG TGCCCTGTCG AACCTGGTGG GAGAGCTGTC CACGCGCAGC GAGGACTTCC GGACCCGGTG GGCGGCGCAC AACGTCCACC AGCACCGCAC GGGCACCAAG ACCATGCACC ATCCCGTCGT GGGCAGGCTG GAGCTGGGCT TCGAGGCCAT GGAACTGACC GCGGACCCCG GCCTGTCGCT CTTCGCCTAC AGCGCCGAGC CTGGCTCGCC CTCCGCGGAG GGACTGGACC TGCTGGCGAG CTGGGCCGTC ACCTCCGAAC GCGAGCGGGA CGGGGCCCCG GCGGCCGACG GCGACCCGGC CGCCTCCTCC CCGCGTTCGG ACACCTAA
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Protein sequence | MDHRNQIRDF LSTRRGRITP EQAGLVAFGG NRRVPGLRRE ELAMLAGVSV DYYTRIERGN LKGVSESVLH ALAEALRLDD AERAHLFDLA RTAGEAPGRP RRRSARQRVR PGVQRILDAM TGAPAVVQNG RLDILAANRL GRALYAQVLD MSGRPANYAR FAFLDPRARD FYPDWERAAN DTVAVLRTAV GRDPYDRALS NLVGELSTRS EDFRTRWAAH NVHQHRTGTK TMHHPVVGRL ELGFEAMELT ADPGLSLFAY SAEPGSPSAE GLDLLASWAV TSERERDGAP AADGDPAASS PRSDT
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