Gene Ndas_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1629 
Symbol 
ID9245479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1997486 
End bp1998934 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content68% 
IMG OID 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_003679564 
Protein GI297560590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.835214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACC CCCCGGACGA ACACGTCCGC CGACCCGGCG TGGCGGCGGC GTGCGTCCCC 
GTGGTCATCA CCGTCGCCAT CCTGGTCGGC GGCATCGGCG TCCTGAAGTA CCCCGCCGAG
CTCATGCTCA TCTTCGCGGG GGTGGTGTTC GCCCTCTTCG CGCTCTGGCA CGGCGTGCGC
TGGGACGACG TGCTGACGAA CATGGGCGAC AAGCTCAGGA GCGCCCTGCC CGCGGTCCTG
ATCCTGCTGA GCATCGGCAT GCTCATCGGC TCGTGGATGA TCGCCGGGAC GATCCCCCTC
ATGGTCTACT ACGGCCTGGA GCTCATCAAC CCGTCCTACC TGTACGTGCT GGCCTTCCTG
GCCACCGCGC TGGTCTCCAC CTTCACCGGC ACCTCCTGGG GCTCGGGCGG CACGATCGGC
GTCGCCCTGA TCGGGGTGGC CCAGACGATG GACGTGTCGC TGGCGATCAC GGCGGGCGCG
GTCGTGTCCG GCGCCTACTT CGGGGACAAG CTCTCGCCGC TGTCGGACAC CACCAACATG
AGCTCGCTCG CGGCGGGCGC CAACCTCTAC GAGCACATCC GGCACATGCT CTACACGGCC
GTGCCCTCGT CGGTGCTGGC CGCCGTCGTC TTCCTGCTCG CGGGCACCAC CATCACCACC
TCGTCCGCCG GTCTGGGCGG TATCGACGAG GTCGTCACCG AACTGAACGA GCTGTTCACC
CTCAACCCGC TGCTGCTGAT CCCGGCGGTG GTCGTGCTCG CCGGGTCGAT CATGCGCAAG
CCTCCGCTGG TCGTGCTGTT CGCGTCGTCC ATGACGGCGC TGCTGATCGC GCTGCTGGTC
CAGGGGGCGA GCGTGGGCGA CCTGTTCGCC GCGGTCGTCT CCGGCTTCAC CACCGACATG
CTGCCGCAGG GGGACGGGGT CTCCGACGTC CTGGCCGAGC TGGTGAACCG GGGCGGGCTG
TACTCGATGT ACAACTCGGC GTTCTTCGTC TTCTGCGCCT TCTTCTTCGC CTCGGCGCTG
GAGAAGTCGG GCGTGCTGCG GGTCCTGCTG GAGGGGCTCA TCGCCAGGCT GCGGTCCACA
GGAAGCCTCA TCCTCACCAC CCTGCTCTCC GGCTTCACCA TCATCAACGG CACCTCCAAC
GCGCTGGTGT CCTTCTTCCT GGTCAAGGAC GTCTACGGCG ACGCCTACCG GGCCAGGAAC
CTGCACCCGG TCAACCTGTC GCGCAGCATG GAGGACTCGG TCACGATCAC CGAGGTGCTG
ATGCCCTGGA CGGTGTCGGG CGTCTTCTTC GCCACCACCC TGGGCGTGGC CAACTTCGAG
TTCCTGCCGT GGGCGGTGTT CAACTGGAGC GGTTTCCTGT TCTCCGCCCT GATCGCCTTC
CTCGCGCCGC TGACCCGGGG TTTCGGCATC CGCCGCCTCG AACCGGAGCA GGAGCGCTCC
ACGACGTGA
 
Protein sequence
MANPPDEHVR RPGVAAACVP VVITVAILVG GIGVLKYPAE LMLIFAGVVF ALFALWHGVR 
WDDVLTNMGD KLRSALPAVL ILLSIGMLIG SWMIAGTIPL MVYYGLELIN PSYLYVLAFL
ATALVSTFTG TSWGSGGTIG VALIGVAQTM DVSLAITAGA VVSGAYFGDK LSPLSDTTNM
SSLAAGANLY EHIRHMLYTA VPSSVLAAVV FLLAGTTITT SSAGLGGIDE VVTELNELFT
LNPLLLIPAV VVLAGSIMRK PPLVVLFASS MTALLIALLV QGASVGDLFA AVVSGFTTDM
LPQGDGVSDV LAELVNRGGL YSMYNSAFFV FCAFFFASAL EKSGVLRVLL EGLIARLRST
GSLILTTLLS GFTIINGTSN ALVSFFLVKD VYGDAYRARN LHPVNLSRSM EDSVTITEVL
MPWTVSGVFF ATTLGVANFE FLPWAVFNWS GFLFSALIAF LAPLTRGFGI RRLEPEQERS
TT