Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1627 |
Symbol | |
ID | 9245477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1993513 |
End bp | 1996845 |
Gene Length | 3333 bp |
Protein Length | 1110 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | AAA ATPase central domain protein |
Protein accession | YP_003679562 |
Protein GI | 297560588 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.856063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACGG TCCGAATCTC GCAGACCGAC CCCTACGCCT TCCCCAGTCT GGGCGCGGCG CTGCGGGCCC CGATGTACGC GGGAAGTGAC CTGTACCTGC ACGTCGAGCC GGGCCACTAC ACCGAACCCC AGGTGGTCGG CGTGAACCGG CACGTCATCG TGGTTCCCCT CCAGGGCCCC GGCACCGTGA CGGTCGCGGC GGGCGACACG AACGTGTTCA ACGTGCACAA GGGGCGGCTG GAACTGCACG GTGTGCACGT GCGCAACGCC TCAGCCGAGT ACCCGCCCGT GTACGTGCAC CCCGAAGCCT TCCTGAAGGC CGTCGACTGC GCCTTCTCCG CGAGTACGCA AGTGAACGTG AAGAACACCG AAGCCGAGTT CACCAACTGC GGGTTCGCGG GCGGCGGACT CTACATGGAC GGCTCCACGG GCAAGGTGGA CGGCTGCCGT TTCACCGACG CCGTGCTCGT CGTCGAGGGC CCGGGCTCCC CCGAGATCCG CCGGACCACC TTCACCGGGG GCCACGACAC ATGGCACACC CTGCACATCT CCAAGGCCTC GCCCACGGTC ACCGACTGCG TCCTGACCGA CTGCGGAGGG GAGAGGACCC AAGCGGTCCA CGTGCGGGAC TCCGCCGCTC CGAAGTTCAC CAACCTGACG ATCACCGGGG ACCGGGGCTG GCCGGTACGG GTGACCGGAC GCTCCAGGGC GGAGTTCGAC CGCCTCAGGG TGGACGGCGG CCGTGCCGGA GGCGACTCCG TGTACGCCTG GGACGACTCC GAGATGACCA TCACCCACGG CCGCATCACC AACGCCAGGG CCAGTGCCCT GGCGACCGTC GGGGGCGCGT TGACCGTCCG GGACCTGGTC ATCGAGGACG CTGCCCGGAC AGGCCTCCAC GGGGAGGGGG CCAGGGTCAG CGGTGAGGGG CTGTCCCTGA CCCGTGTCGG TGGGAACGGG GTCTACGTCG AGGAGTGCCG GACGACGCTC TCCGACGTCG AACTGCGTGA CAGCCCCCAG GAGGCACGGG AGAAGTGGAG CGTGTTCGCC GCGCAGAAGG GGCGGTTCGA GGTCACCGGG TTGCGCGCCT CGAAGTCGCC GACGATGGTG CACATCGTCG ACGCGCGGGG AAGCCTGACC GATCTGACCG GGGACGACGT CGAGGGTGGC CTCCTCGTCA GGCAGGACAG CACGGTCACG GTCAGCGCGG CGACGGTCAC CAACAGCAGT CTCAACGCGC TGACCGTCAA CGAAGGGTCC GAGGTCGAGG TCGACAGGAT CCAGATCTCG GACTGTTCCC TGCACGGTGT CTACGCGGGG GGCGAGTCGC GGCTGGTCCT GCGCTCGTCG ACGGTGAGCG GGTGCGCGTC GGCCGGAGTC GGCGTGGAGA ACGGGGCCGT GGTCACGTTG GAGGACACCG TGGTCCGGGA CGGGGACAGC TCCGGGCTGG CCGTGTACGG CACCAGCAGG GTGCGCCTGG TGGGGTGCAC GATCTCCGGC AACGCCGCTG AGGGGGTGGA CGCCGAGGAC ACCGCCACCG TGCAGACCGA GGACACCGAG ATCACCGGGA ACGGGGGCGG TGACCGGGTC CAGGCGCGGG CCGCGACCGG CAGCGGCGGC GCGGCCGTGC CGGACGCGCC CGAGGGGGAG GTGCGGCCGC TGGAGGAACT GCTGGCCGAA CTGGACGCCA TGGTGGGCCT GGACGGGGTG AAGAAGGAGG TCCGCGCCCT CGTCAACTTC CAGCAGGTCA GCGTCAAGCG TGCGGCGGCG GGGCTGCCCG CGCTCAACGT CAGCCGCCAC CTCGTCTTCT CCGGGCCGCC CGGAACCGGC AAGACCACCG TGGCCCGGCT CTACGGGCGG ATCCTGCGCT CCCTGGGCGT GCTGGGGAGC GGCCAGTTCG TGGAGGCCGC CCGCCCCGAC CTCGTGGCCG AGCACCTGGG CGGCACCAGC ACCAAGGTCA CCGAGGTGGT CGAGCGGGCC CGGGGCGGTG TGCTGTTCGT CGACGAGGCG TACGCGCTGT CCCGCAAGTT CGGCAGCGGA TCGGACTTCG GCCAGGAGGC CATCGACACC CTCATCAAAC TCATGGAGGA CCTGCGCGAG GAGGTCGTCG TCATCTTCGC CGGGTACTCC AGTGAGATGC GCGGCTTCCT CGACGCCAAC CCCGGGCTGC GGTCGAGGGT CGCCCGCACC GTCGAGTTCG AGAACTACTC GCCCGAACAG CTCACGACCA TCTTCACGGG GATGGCGGAC AGGCAGGGCT ACACGCTGGG GGAGGGCACC CGGGAGCTGC TCATCCGGCA CTTCCAGGCG CAGAAGCGCG ACGAGACCTT CGGCAACGGG CGCGAGGCGC GCCGCGTGTT CGAGGAGACC GTCCAGACCC AGGCGACCCG GATCGTCGAC GGCGACTTCG GTTCGGCGCG GGACCTGTCA CTGATCCTGC CGGAGGACCT CGCCGACGTC GTGGACGGCG GGCTCTCCGC CAGGGTCGCG GAGGGGCCCA GGGACGCCGG TCAGGTCGAG GAGCTGATGC GCCGCCTGGA CGCCATGGTG GGCCTGGCGG CGGTGAAGCG GGAGGTGGCC GACCTGGTGA ACCTGATCTC GGCCGGACGC CGGCGGCAGG CGGCCGGGCT GGAGGCCCCG CTGCCCTCGC GGCACCTGGT CTTCGCCGGG CCCCCGGGGA CGGGCAAGAC CACGGTCGCG CGGGTCTACG GGGAACTGCT GGCCGCCCTG GGGGTGCTCG CCCAGGGGCA GGTGGTGGAG GCCAGCCGGG CGGACCTGGT GGGCTCGTAC GTGGGCCACA CCGCCCAGCG CACGCGTGAC GTGTTCGACC GGGCGCGCGG AGGCGTGCTG TTCATCGACG AGGCGTACGC GCTCGCCCGG CCGGGCGGCA GCGGCTCCGA CTTCGGCCAG GAGGCCGTCG ACACGCTCCT GAAGCTGATG GAGGACCACC GCGACGAGGT GGTGGTGATC GCCGCCGGTT ACACCGGGGA GATGCGCGAG TTCATGGCGA GCAACCCGGG GCTGGAGTCG CGGTTCTCCG GGACGGTGGA GTTCGCCCCC TACGACGCGG ACGAGCTGGT GCGGATCTTC GTCGGGATGG CCGAGGGCAG CGACTTCCTG GTGCCCGAGG AGACGCGCGG GGCGCTGGGC GCGTTGGTGG TCGAGCGGGC CGGGGTGTTC GGGGACGGCA ACGGGCGCGA GGTCCGCAAG CTGTTCGAGG AGAGCGTGAT CCGCCAGTCG CGGCGGATCG AGACGGCGGC CCTGGCGGGG GAGGTCCCCG GGGTGGCGGA GCTGCAGACC CTGCGCCCCG AGGACGTCGT GGGAGCTCCG TAG
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Protein sequence | MYTVRISQTD PYAFPSLGAA LRAPMYAGSD LYLHVEPGHY TEPQVVGVNR HVIVVPLQGP GTVTVAAGDT NVFNVHKGRL ELHGVHVRNA SAEYPPVYVH PEAFLKAVDC AFSASTQVNV KNTEAEFTNC GFAGGGLYMD GSTGKVDGCR FTDAVLVVEG PGSPEIRRTT FTGGHDTWHT LHISKASPTV TDCVLTDCGG ERTQAVHVRD SAAPKFTNLT ITGDRGWPVR VTGRSRAEFD RLRVDGGRAG GDSVYAWDDS EMTITHGRIT NARASALATV GGALTVRDLV IEDAARTGLH GEGARVSGEG LSLTRVGGNG VYVEECRTTL SDVELRDSPQ EAREKWSVFA AQKGRFEVTG LRASKSPTMV HIVDARGSLT DLTGDDVEGG LLVRQDSTVT VSAATVTNSS LNALTVNEGS EVEVDRIQIS DCSLHGVYAG GESRLVLRSS TVSGCASAGV GVENGAVVTL EDTVVRDGDS SGLAVYGTSR VRLVGCTISG NAAEGVDAED TATVQTEDTE ITGNGGGDRV QARAATGSGG AAVPDAPEGE VRPLEELLAE LDAMVGLDGV KKEVRALVNF QQVSVKRAAA GLPALNVSRH LVFSGPPGTG KTTVARLYGR ILRSLGVLGS GQFVEAARPD LVAEHLGGTS TKVTEVVERA RGGVLFVDEA YALSRKFGSG SDFGQEAIDT LIKLMEDLRE EVVVIFAGYS SEMRGFLDAN PGLRSRVART VEFENYSPEQ LTTIFTGMAD RQGYTLGEGT RELLIRHFQA QKRDETFGNG REARRVFEET VQTQATRIVD GDFGSARDLS LILPEDLADV VDGGLSARVA EGPRDAGQVE ELMRRLDAMV GLAAVKREVA DLVNLISAGR RRQAAGLEAP LPSRHLVFAG PPGTGKTTVA RVYGELLAAL GVLAQGQVVE ASRADLVGSY VGHTAQRTRD VFDRARGGVL FIDEAYALAR PGGSGSDFGQ EAVDTLLKLM EDHRDEVVVI AAGYTGEMRE FMASNPGLES RFSGTVEFAP YDADELVRIF VGMAEGSDFL VPEETRGALG ALVVERAGVF GDGNGREVRK LFEESVIRQS RRIETAALAG EVPGVAELQT LRPEDVVGAP
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