Gene Ndas_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1508 
Symbol 
ID9245358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1847819 
End bp1849129 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content69% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003679444 
Protein GI297560470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000388947 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00249472 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGATGA CGACCGCAGC GCCCGAGGCG GACCCCGGGG AATGTTCCCC GGCCGTGGCC 
GCGCTGGCCG GTGCGCGCGA GATCATCCAC CAGGCGTTGA ACGCCGAGGT GCCACCCGGG 
GCCGACGAGG CCGCCGCTGA GGAGATCGCG GCGCTGTGGG CTCAGCTGGA CCAGATCCGG 
TATCAGGCGT TGGCACAGAT GGCGCGTTTG TACGCACGTG GTGAGGTCGC CCGCTACAGC 
GGCTACTCCA CGCTGGACAA GTGGATCACC CACCACTGCA AGGTCCCCAC CGCTCAGGCC 
AAGGACCTGG CTCGTTTGGC CCAGCACGTG CAGGAGGAGA CACTGCCCGC CACTGCCCAA 
GCAGTAGCTG AGGGCAGGGT GGTGTTGGGT GAGGCGGTCG CGATCGCCAA GGCCACTGAC 
AAGGCCGTCC AGACCCGCGA TGAGGACCGC TTTCCCGATG AGGTGGAGTA TCGGCACGGG 
TTTGAGTCCG CCCTGGTGGC CGCGAAGGCG GAGCGGCCCG CGTTGTCGGT CAACCAGCTC 
CAGTCGGTGG CCCGCCAGGT CGCCTACCGT TTGGACCCCC ACCGCCTGGA CCGCGACCAC 
GAGGCCGCCC ATGCCGTCCG CGGGCTGACG GTGCATGACA CGTTCCAGGG CAGCTACCAA 
CTCCAGGCCT GGGGTGGGTC TGGGGATGCG TTGATCGTGC GCGCGGCCAT CGACACCTTC 
GACGTTTCGC ACTCGGATGA GGACACCCGG TCCCGGTCCC AGCGCGAGCA TGACGCGCTC 
ATCGCGGCGC TGCGTTTTGC CACCACCCAC ACCGGATGCG CCAACGCTCC GGCTCCATTG 
GCGCAGATCC GCATCGTCGT GCCCGTGCAG ACCTACCTGG ACGCCCAAGG CCAAGAGGTT 
CCCGCGTTGG ACGAGCACGG TCGGGTGATC CCAGCCGGTG TGGTCCACGA ACTGGCCGCC 
GATTCTGAGG TGGTGCGGAT GCTCACCGCA CCCCCCACCG GACAGGTGCT GGACGTGGGC 
CACAGCCGCC GCCTGGCCTC AACCCGCCAA CGCACCGCCG CCTTCCACGG ACACGCCACC 
TGCGCCCACC CGGGCGGATG CGAAGTGCCA GTCGCCCTCT GCCAAGCCGA CCACGTGCAG 
TCGTTCTCCC GAGGCGGACG CACCGTGGTC GCCAATCTCC AACCGTTGTG CGGGCCGCAC 
AACCGGGCCA AGTACCAACG CGAACTGCGC ACACACCACC AAGGACGGCG GCGGGGACGG 
GGAGGAGACC ACCCACCCGG CGGGGAGCCG GATCCACCAC CCCGGGAATG A
 
Protein sequence
MEMTTAAPEA DPGECSPAVA ALAGAREIIH QALNAEVPPG ADEAAAEEIA ALWAQLDQIR 
YQALAQMARL YARGEVARYS GYSTLDKWIT HHCKVPTAQA KDLARLAQHV QEETLPATAQ 
AVAEGRVVLG EAVAIAKATD KAVQTRDEDR FPDEVEYRHG FESALVAAKA ERPALSVNQL 
QSVARQVAYR LDPHRLDRDH EAAHAVRGLT VHDTFQGSYQ LQAWGGSGDA LIVRAAIDTF 
DVSHSDEDTR SRSQREHDAL IAALRFATTH TGCANAPAPL AQIRIVVPVQ TYLDAQGQEV 
PALDEHGRVI PAGVVHELAA DSEVVRMLTA PPTGQVLDVG HSRRLASTRQ RTAAFHGHAT 
CAHPGGCEVP VALCQADHVQ SFSRGGRTVV ANLQPLCGPH NRAKYQRELR THHQGRRRGR 
GGDHPPGGEP DPPPRE