Gene Ndas_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1477 
Symbol 
ID9245327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1810307 
End bp1811011 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content74% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003679414 
Protein GI297560440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.594471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTCT CAGTACTGCT GGTCGACGAC CAGCCCCTCG TCCGCGCCGG CTTCCGCATG 
ATCCTGGAGT CCGCCCCGCA CCTGTCCGTC GTGGGCGAGG CCTCCGACGG CCGCGAGGCG
GTCCGGGCGA CCCGCGGCCT GCTGCCCGAC GTCGTCCTCA TGGACGTGCG CATGCCCGGC
ATGGACGGGA TCGAGGCCAC CCGGCAGATC GTGTCGTGGG CGCGGCCCCT GGGACACCGG
GTACGGGTCC TGGCGCTGAC CACCTTCGAC CTGGACGAGT ACGCCGTCGA GGTGCTGCGC
GCGGGCGCCT CCGGGTTCCT GCTCAAGGAC GCGCCGCCCG CCGAACTCGT CTCGGCCGTG
GAGGTGGTCG CGGACGGGGC GGCGGCCATC TCCCCCGCGG TGCTCAACCG CCTGCTCGAC
CGCTTCGCCC CGCTCCTGCC CTCCGCCTCC CCCGCCACCG AACCCGCCGA GGACACCCTG
ACCGCCCGCG AGCACGAGGT CCTGCGCCTG CTCGCACGCG GGTGGTCCAA CGCCGAGATC
GCCGCCCACC TGGTCCTGGG CGAGACCACC GTCAAGTCCC ACGTCGGCAG CATCCTCACC
AAGCTGGAAC TGCGCGACCG GGTCCAGGCG GTGGTCTACG CCTACGAGCA CGGACTGGTC
CGCCCCGGTG AGCGCGACCA CGGCTCCGGA CCCCACTCCG GCTGA
 
Protein sequence
MPVSVLLVDD QPLVRAGFRM ILESAPHLSV VGEASDGREA VRATRGLLPD VVLMDVRMPG 
MDGIEATRQI VSWARPLGHR VRVLALTTFD LDEYAVEVLR AGASGFLLKD APPAELVSAV
EVVADGAAAI SPAVLNRLLD RFAPLLPSAS PATEPAEDTL TAREHEVLRL LARGWSNAEI
AAHLVLGETT VKSHVGSILT KLELRDRVQA VVYAYEHGLV RPGERDHGSG PHSG