Gene Ndas_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1407 
Symbol 
ID9245257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1725398 
End bp1726132 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content75% 
IMG OID 
Productprotein of unknown function DUF161 
Protein accessionYP_003679345 
Protein GI297560371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.593971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAC AGCCCCGCCC CGCCCGTGAC GCGGCCGCCG CTCTGCTGGG CCGGGTGCTG 
GTCACCCCCG CCCTGCCCCG GCCCCGGCTG CGCCGCCTGG CGCAGCTGTA CGCGGGCCTG
GTCCTCTACG GGCTGAGCGG CGCGCTGCTG GTGCACGCGG GGCTGGGCGC GATGCCCTGG
GACGTGCTGC ACCAGGGGTT GTCCCGACAG ACGGGGCTGT CCATCGGCAC GTGGAGCGTG
CTGGTGGGCG CGATGCTGAT GCTGCTGTGG ATTCCGCTGC GCCAGAAGCC GGGTCTGGGC
ACGCTGAGCA ACGTGGTCGT CGTGGGGATG ACGGTGGACC TGTTCCTGTG GCTGCTGCCC
GAGGCGGATT CGCTGGTGGT GCGGGTGCTG CTGCTGGGGC TCGGGGTGGT GGTGTGCGCG
GTCGCGACCG GGTGCTACAT CGGCGCCCAA CTGGGGCCGG GTCCCCGGGA CGGGCTGATG
ACCGGCCTGG CGGGCCGGGG GTGGTCGGTG CGCCTGGCCA GGACCGTGAT CGAGGTGACC
GTCGTGGTCA CCGGCTTCCT CCTGGGCGGG ACCGTGGGGG TGGGCACTCT GGTGTTCGCG
GTGGCGATCG GGCCGCTGGC CCAGGTCTTC CTGCCCCTGA TGCGCGTGCC CGATCCGGTC
GCCGGGCGGT CCGGTCCCCG CCGGTCCCGG GGAGCCGAGC GCGGGAGTGC GCCGGGGCCC
GTGCACCCGG AGTGA
 
Protein sequence
MTAQPRPARD AAAALLGRVL VTPALPRPRL RRLAQLYAGL VLYGLSGALL VHAGLGAMPW 
DVLHQGLSRQ TGLSIGTWSV LVGAMLMLLW IPLRQKPGLG TLSNVVVVGM TVDLFLWLLP
EADSLVVRVL LLGLGVVVCA VATGCYIGAQ LGPGPRDGLM TGLAGRGWSV RLARTVIEVT
VVVTGFLLGG TVGVGTLVFA VAIGPLAQVF LPLMRVPDPV AGRSGPRRSR GAERGSAPGP
VHPE