Gene Ndas_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1296 
Symbol 
ID9245146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1600497 
End bp1601357 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003679240 
Protein GI297560266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGC CATACAGCCC CAGCATCCGA CGGCGTCGTC TCTCGTCCGA ACTCCGTCGG 
CTTCGCACTG AAGCAGGCTT CACGCTGGCC GAAGCCGCCA AGCAGGCTGG CCTGGGCCGA
TCGAACCTCG GCAAGATGGA ACAGGCTGAG TCCAGGACCG TCCCCACAGC GGCCCTGGAC
AAGCTGTTGG ACCTCTACAA CGTGCACGAA ACGCAGACGC GAGAGGCCAT GCACGCACTC
GCCCAAGACG CCAAGCAACG TGGCTGGTGG TCGAAGTACA AGGGGCTCTT CGACGACGAC
CGTGCGCTTC CTGACTTCGA AGCGGAGGCC TCCACCATCC GGACCTTCGA GGCTCTGTGC
ATCCCGGGTC TACTACAGAC ACCCGAGTAC GCTCATGCGC TGTTCGAGGG TGGGCGGTAC
ACCTCTCTGC CCGCGATCGA ACGGAGAGTC GCCTTCCGGA TGGCTCGAAG GGAAATCCTG
ACCCGAGTAC GACCTGCGCA TTTCCGTGCC GTACTCGATG AGGCAGCCCT GCGACGGGTC
ATCGGCGGAC CGGATGTCAT GCATGCGCAA CTCATGCACC TGTTGCACAT GGCAGAGATG
CCACACGTCG ACGTGCAGGT CATTCCGTTC CAAGATGGCT CCCACGCAGG CCTCACGGCC
CCATTCGCAA TCCTGGACTT CCCAGATCCA CGAGACAGCT CCATCGTCTA CGTTGGGACG
ATCGCCGGTT CTGTCTTCTT CGAGCAAGAA GACGAAGTAG AGCGCTATAA CGTGACCTAC
GGGGACCTAC AGGGGTCCGC ATTGAGCACC AAACAGTCTG CCGCTCTCAT CAAAACGGCA
GCGGACTCAC TGAGAGAGTG A
 
Protein sequence
MPTPYSPSIR RRRLSSELRR LRTEAGFTLA EAAKQAGLGR SNLGKMEQAE SRTVPTAALD 
KLLDLYNVHE TQTREAMHAL AQDAKQRGWW SKYKGLFDDD RALPDFEAEA STIRTFEALC
IPGLLQTPEY AHALFEGGRY TSLPAIERRV AFRMARREIL TRVRPAHFRA VLDEAALRRV
IGGPDVMHAQ LMHLLHMAEM PHVDVQVIPF QDGSHAGLTA PFAILDFPDP RDSSIVYVGT
IAGSVFFEQE DEVERYNVTY GDLQGSALST KQSAALIKTA ADSLRE