Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1285 |
Symbol | |
ID | 9245135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1592872 |
End bp | 1593591 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | CRISPR-associated protein, Cse3 family |
Protein accession | YP_003679229 |
Protein GI | 297560255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCTCA CCCGATTCCG GTTCAACACC CACCGCCCCG GAGCGAGGAA GCTGCTGTCC TCGCCGCAGG CCCTGCACGC GGCCGTGATG GGCTCCTACG CCGACCTGCT GCCCAGCGAT ACCGGCGGCC CCCGGGTGCT GTGGCGGGTG GACCGCAACG CCCGCGCGGA GGTGTTCCTG TACGTGGTGG GCCCGAACCG GCCCGACCTG ACCCACGTGG TGGAACAGGC GGGGTGGCCG ACCGATCCCG CGAACACGTG GCAGACGCAC GAGTACAGCG GGTTCCTGAA GAGGCTGGAG GCCGGGCAGA CGTGGGCGTT CCGGCTCACC GCCAACCCCG TGCACAGCAT CCGCCGCAAG GACGGCGAGC CCACCAAGCT CACCGCGCAC GTCACCCCAC GCCACCAGGC GGGATGGCTG CTCCAGCGGC AGGAGCGGTG CGGCTTCGAG ATCGTGCGCA AGGACGCTGA GCAGCAGCTC CTTCCGGGCC AGGACGAGCA CGAACTGGTC GTGCACGACC GCGACGCGCG CGGCTTCGAC AAGGCGGATC CGCGTCCGGA CCGGCGGGGC AAGCGGATGA AGGTGCCTGT GGTCACCGCG ACCTTCGACG GCAGGCTGAC CGTCACCGAT CCCGACGCGC TGCGCCGCAC GCTGTGCGCC GGACTGGGCC GGGCCAAGGC CTACGGCTGC GGGCTGATGA CCCTGGCGCC GGTGGGCTGA
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Protein sequence | MYLTRFRFNT HRPGARKLLS SPQALHAAVM GSYADLLPSD TGGPRVLWRV DRNARAEVFL YVVGPNRPDL THVVEQAGWP TDPANTWQTH EYSGFLKRLE AGQTWAFRLT ANPVHSIRRK DGEPTKLTAH VTPRHQAGWL LQRQERCGFE IVRKDAEQQL LPGQDEHELV VHDRDARGFD KADPRPDRRG KRMKVPVVTA TFDGRLTVTD PDALRRTLCA GLGRAKAYGC GLMTLAPVG
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