Gene Ndas_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1285 
Symbol 
ID9245135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1592872 
End bp1593591 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content72% 
IMG OID 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_003679229 
Protein GI297560255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTCA CCCGATTCCG GTTCAACACC CACCGCCCCG GAGCGAGGAA GCTGCTGTCC 
TCGCCGCAGG CCCTGCACGC GGCCGTGATG GGCTCCTACG CCGACCTGCT GCCCAGCGAT
ACCGGCGGCC CCCGGGTGCT GTGGCGGGTG GACCGCAACG CCCGCGCGGA GGTGTTCCTG
TACGTGGTGG GCCCGAACCG GCCCGACCTG ACCCACGTGG TGGAACAGGC GGGGTGGCCG
ACCGATCCCG CGAACACGTG GCAGACGCAC GAGTACAGCG GGTTCCTGAA GAGGCTGGAG
GCCGGGCAGA CGTGGGCGTT CCGGCTCACC GCCAACCCCG TGCACAGCAT CCGCCGCAAG
GACGGCGAGC CCACCAAGCT CACCGCGCAC GTCACCCCAC GCCACCAGGC GGGATGGCTG
CTCCAGCGGC AGGAGCGGTG CGGCTTCGAG ATCGTGCGCA AGGACGCTGA GCAGCAGCTC
CTTCCGGGCC AGGACGAGCA CGAACTGGTC GTGCACGACC GCGACGCGCG CGGCTTCGAC
AAGGCGGATC CGCGTCCGGA CCGGCGGGGC AAGCGGATGA AGGTGCCTGT GGTCACCGCG
ACCTTCGACG GCAGGCTGAC CGTCACCGAT CCCGACGCGC TGCGCCGCAC GCTGTGCGCC
GGACTGGGCC GGGCCAAGGC CTACGGCTGC GGGCTGATGA CCCTGGCGCC GGTGGGCTGA
 
Protein sequence
MYLTRFRFNT HRPGARKLLS SPQALHAAVM GSYADLLPSD TGGPRVLWRV DRNARAEVFL 
YVVGPNRPDL THVVEQAGWP TDPANTWQTH EYSGFLKRLE AGQTWAFRLT ANPVHSIRRK
DGEPTKLTAH VTPRHQAGWL LQRQERCGFE IVRKDAEQQL LPGQDEHELV VHDRDARGFD
KADPRPDRRG KRMKVPVVTA TFDGRLTVTD PDALRRTLCA GLGRAKAYGC GLMTLAPVG