Gene Ndas_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1171 
Symbol 
ID9245021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1427577 
End bp1429049 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content74% 
IMG OID 
Productsodium/hydrogen exchanger 
Protein accessionYP_003679118 
Protein GI297560144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.246697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGC ACCTGCCCGC CGACGGGTGG ATCCTGGCGG CCGGGCTCCT GCTGGTGGCG 
GCGATCCTGG CCTCGGGCTT CGCCAACCGC ATCCGGCTGC CCGGCCTGCT GCTGTTCCTG
GCGCTGGGCA TGTTCATCGC CGACGACGGG CTCGGGCTGA TCCGCCTGGA CAACCCCGAG
ATCGCCCAGA TCGGCGGGAC CGTCGGACTG ATCCTCATCC TCTTCGAGGG CGGCCTGACG
ACCAAGCCCG GGGACCTGCG GCGCGCCGCC GCGCCCGGGT TCGCGCTGGC CACGGTGGCG
GTGGCGGGCA CGGCGCTGAT CCTGGCGGCG GGCACGTACC TGCTGCTGGA CGTGCGCCCC
CTGACCGCCC TGCTCATCGG CGCGGTCGTG GCCCCCACCG ACGCCGCGGC GGTGTTCGCC
ATGCTACGGA GGGCCCCGCT GCCCCGCAAG GTCGCCTCCC TGCTGGAGGT GGAGTCCGGC
GCCAACGACC CGATCGCCAT CCTGCTCACC ATCGGACTCA TCGCCACCTG GCGGGACACG
CCGTCGTCGG CCGAGTGGGC GCTGTTCGCC CTCATGCAGC TGGTCGGGGG CCTGGCCGTG
GGCGCCGTGG CGGGGCTGGC CGGAAGCTGG CTGCTGACCC GGATCAACCT GGGACCGGCG
GGGGTCTACC CGGTGCTGGC GCTGGGCGTG GCCGGGGTCT CCTACGGCGC CGCGGCGCTG
GCGGGCGCCT CGGGCTTCCT GGCGGTCTAC GTCACCGGGC TGGTCGTGGG CGCCCGCGCT
CCCCTGCGCC GGCGGGGCAT CCGGACCTTC CACGAGGGGC TTTCCAGCAC CGCCGAGGTG
GGGCTGTTCC TGCTGCTGGG GATGCTGGTC TTCCCCTCCG ACCTGCCGGG GGTGGCGCTC
TCGGGGCTGG CCGTCAGCGC CGTCCTGGTG CTGGTGGCCC GACCGGTGAC GGTGGCTCTG
TGCCTGGTGT GGTTCGACTA CACGTGGCGG GAGATCGCCT TCGTCAGCTG GGTGGGGCTG
CGCGGGGCCG TGCCGATCGT GCTGGCCACG TTCCCCTTCG TGGCCGGGTA CCCCGACGGC
GCCCTGGTCT TCGACATCGT CTTCTTCGTC GTGCTGGTCT CCGCGGCGGT GCAGGGCACC
AGCATCCGCA CCGCCGCGGG CCTGCTGGGG CTGACCCGGG GCGGGCACTC GCTCGAACCC
GTGGTGGCGG ACGTGCCCAT CAGCGACCTG GGCACCGAGC TGATCGAGGT GCGCGCGGCG
CCGGGGCTCC ACATCGTGGG CAGGCGGCTC GGGGAACTGG AACCGCCGCA CGGCCTGGTC
ACCACGATCC TGCGGGGCAA GCGGGTGCTG GTGCCCTCGG CGCACACCCG GATCCGCGAG
AACGACCTGC TCATCGTGGC CATGCCGCGC CGACCCGACG CCCAGAGGCT GGTCACCGCT
TGGGCCAAGG GCGAGAGCGC GGGCGGGGCC TGA
 
Protein sequence
MTVHLPADGW ILAAGLLLVA AILASGFANR IRLPGLLLFL ALGMFIADDG LGLIRLDNPE 
IAQIGGTVGL ILILFEGGLT TKPGDLRRAA APGFALATVA VAGTALILAA GTYLLLDVRP
LTALLIGAVV APTDAAAVFA MLRRAPLPRK VASLLEVESG ANDPIAILLT IGLIATWRDT
PSSAEWALFA LMQLVGGLAV GAVAGLAGSW LLTRINLGPA GVYPVLALGV AGVSYGAAAL
AGASGFLAVY VTGLVVGARA PLRRRGIRTF HEGLSSTAEV GLFLLLGMLV FPSDLPGVAL
SGLAVSAVLV LVARPVTVAL CLVWFDYTWR EIAFVSWVGL RGAVPIVLAT FPFVAGYPDG
ALVFDIVFFV VLVSAAVQGT SIRTAAGLLG LTRGGHSLEP VVADVPISDL GTELIEVRAA
PGLHIVGRRL GELEPPHGLV TTILRGKRVL VPSAHTRIRE NDLLIVAMPR RPDAQRLVTA
WAKGESAGGA