| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1086 |
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| Symbol | |
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| ID | 9244932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 1334308 |
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| End bp | 1336152 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | glycoside hydrolase family 2 sugar binding protein |
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| Protein accession | YP_003679034 |
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| Protein GI | 297560060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.358579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACGC ACCAGCGCTC ACAGCGCGGG GACGGGCCCG CCACCCCGCC CCGCCCCGAG
TACCCGCGCC CGCAGTTCAC CCGCCCCGAC TGGCTGTGCC TGAACGGCAC CTGGGACTTC
GAGATCGACC GCGGCGACAG CGGGCTCGAA CGGGGCCTGC GCGAGGCCGG ACTCTCCGGC
ACCATCACCG TCCCCTTCTG CCCGGAGTCG GAGCTGTCCG GCGTGGGCGA CACCGACTTC
ATGGAGGCGG TCTGGTACCG GCGCACCGTC CGCGTCCCCG ACGCCTGGGC GGGACGGCGC
GTCCTACTGC ACTTCCAGGC CGTCGATCAC GACACCACCG TGTGGGTCAA CGGCACGGAG
GTCGTCCGCC ACCGCGGCGG GTTCACCCCC TTCACCGCCG ACCTGTCCGG GGTCGCCGCT
CCCGGCGAGG AGGCCGTGGT GGTCGTGCGC GCCCGCGACA GCCGACACGG CTTCCAGGCC
CGCGGCAAGC AGGCCACCTG GTACGCCAAC ACCGGATGCC ACTACACGCG CACCACCGGG
ATCTGGCAGA CCGTGTGGAT GGAACCGGTC CCCGACACGC ACCTGCGCCG CCCCCGCATC
ACCCCGGACC TGGCCAACGG GGCCTTCCAC CTGCTCCTGC CGCTGTCCGG CAGCGGCGAG
GGCCTGCGGG TGCGCGCCGT CCTGGAGGAC GGGGACGGCG AGGTCACCGC CGCCGAGGCC
CGCGCCGACC TGGACACCGC GCCCCGGCTG ACACTGGCGG TGCCGGTGGA GCGGCGCCGC
GCCTGGTCGC CGCAGGACCC GCACCTGTAC ACGCTGCGCC TGGAACTGCT GGACGCCGAG
GGGAGGGTGG TGGACCGGGC CGGGTCCTAC GCGGGCCTGC GGTCGGTCTC CGTCCAGGGC
AAGGCGATCC TGATCAACGG CCGACGCGTG TTCCAGCGCC TGGTCCTGGA CCAGGGCTAC
TACCCCGACG GGCTGATGAC CGCGCCCGAC GACGCCGCCC TGGTGCGCGA CATCGAACTG
GGTCTGCGGG CCGGGTTCAA CGGGGCCCGC CTGCACCAGA AGGTCTTCGA GGAGCGCTTC
CTCTACCACG CCGACCGGCT CGGCTACCTG GTCTGGGGCG AGTTCGGCGA CTGGGGGTGC
GCGGCCCACG GCGGCCCCGC CGACGACAAC CAGCGGCCGG ACGCCTCCTA CGTGGCCCAG
TGGACCGAAG CCGTGGAACG CGACTACTCC CACCCCAGCG TCGTCGGGTG GTGCCCGCTC
AACGAGACCT TCCAACGGCT GCACGACCGC TTCACCGCGC TGGACGACGT GACCCGCGCG
ATGTTCCTGG CCACCAAGGC GATCGACCCC TCCCGCCCGG TGGTGGACGC CTCCGGGTAC
GCCCACCGGG TCCCCGAGAC CGACGTCTAT GACTCCCACA GCTACGAGCA GGACCCCGAG
GCGTTCCGCA AGCAGATGAG CGGCCTCGCC CAGGACGACC CCTACGTCAA CCGCGGCGCG
GACGGCCGCG ACTGGTCGGT GCCCTACCGC GGCCAGCCCT ACTTCTGCAG CGAGTTCGGC
GGGATCCGCT GGGACCCCGG CACCGACGGC GGCGAGCAGT CGTGGGGGTA CGGCGACGAC
CCCAGGACCC CGGAGGAGTT CCACACCCGC TTCGAGGGTC TGACGGGCGT GCTGCTGGAG
GACCCGGACA TGTTCGGTTA CTGCTACACG CAGCTCACCG ACGTGTTCCA GGAACGCAAC
GGCGTCTACC GGTTCGACCG CGGCGACAAG CTCGACACCG CCCGCATCGC GGCCGCCCAG
CGCAGGACCG CCGCGTACGA GAAGGCCGAT CGTCGGCCCG AGTGA
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| Protein sequence | MPTHQRSQRG DGPATPPRPE YPRPQFTRPD WLCLNGTWDF EIDRGDSGLE RGLREAGLSG
TITVPFCPES ELSGVGDTDF MEAVWYRRTV RVPDAWAGRR VLLHFQAVDH DTTVWVNGTE
VVRHRGGFTP FTADLSGVAA PGEEAVVVVR ARDSRHGFQA RGKQATWYAN TGCHYTRTTG
IWQTVWMEPV PDTHLRRPRI TPDLANGAFH LLLPLSGSGE GLRVRAVLED GDGEVTAAEA
RADLDTAPRL TLAVPVERRR AWSPQDPHLY TLRLELLDAE GRVVDRAGSY AGLRSVSVQG
KAILINGRRV FQRLVLDQGY YPDGLMTAPD DAALVRDIEL GLRAGFNGAR LHQKVFEERF
LYHADRLGYL VWGEFGDWGC AAHGGPADDN QRPDASYVAQ WTEAVERDYS HPSVVGWCPL
NETFQRLHDR FTALDDVTRA MFLATKAIDP SRPVVDASGY AHRVPETDVY DSHSYEQDPE
AFRKQMSGLA QDDPYVNRGA DGRDWSVPYR GQPYFCSEFG GIRWDPGTDG GEQSWGYGDD
PRTPEEFHTR FEGLTGVLLE DPDMFGYCYT QLTDVFQERN GVYRFDRGDK LDTARIAAAQ
RRTAAYEKAD RRPE
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