Gene Ndas_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1083 
Symbol 
ID9244929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1331032 
End bp1331937 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003679031 
Protein GI297560057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.521844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.416861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGC GGAGCATGCG TTCGACGCGG CGGGCCGAGG CGGCCCTGGA CCGCGCCAGG 
CAGCGCGACC TGATGCTGGG CGGGGGCCGC GGACCGCGGA TCGCCGCCGT GTCGGCGCTG
ACGGTCCTCG CGGTGCTGTG GCTGGCCCCC ATGGTGTGGG CGCTGGTCAC CTCGTTCAAG
ACCGAGGGGG ACGCGGTCGC GCTGCCGCCG ACCCTGGTCC CCGGGACCGG GTTCACCCTG
GAGCAGTACC GCAACCTGTT CGAGGCCGGG AACGTGCAGA TGTGGCTGTT CAACAGCCTG
GTCATCGCCG TGCTGGTCAC CCTGCTCACG ATCGTGGTGG CGGCCCCGGC GGCCTTCGCG
ATGTCGCGCA TGGACTTCCG GGGCCGGGCG GCGCTGATGG CCCTCACGGT GGCGGCGATC
GTGGTCCCGC CGCAGCTGCT CATCGTGCCG CTGTTCCAGC AGATGGTGTC GCTGGGCCTG
GTGGACACCT ACGCGGCGGT GATCCTGCCG CAGCTGGTGG CGCCGGTCAT CGTGTTCGTG
CTCAAGCGGT TCTTCGACGC GGTGCCGCGC GAGCTGGACG AGGCGGCCCG CATGGACGGG
GCCTCCTACT GGAGGCTGTT CACGACGGTG ATCATGCCGC TGTCGCGGCC CGTCCTGGCG
GCGGCGTCGA TCTTCGTGTT CATCACCGCC TGGAACAACT ACCTGTGGCC GTTCATCATC
ACGACCGACC CGGCCCTGAT GACGCTGCCC GTGGGCATCC CCAACATCCT GGACTCCTAC
GGCACCTTCT ACGCCTCGCA GCTGGCGGCG TCGATGGTGG CGGCGGCGCC GATGGTGGTC
GTGTTCATGC TGTTCCAGCG CCAGATCGTC AACAGCGTCG CCACGACGGG TCTGGGCGGC
CAGTGA
 
Protein sequence
MATRSMRSTR RAEAALDRAR QRDLMLGGGR GPRIAAVSAL TVLAVLWLAP MVWALVTSFK 
TEGDAVALPP TLVPGTGFTL EQYRNLFEAG NVQMWLFNSL VIAVLVTLLT IVVAAPAAFA
MSRMDFRGRA ALMALTVAAI VVPPQLLIVP LFQQMVSLGL VDTYAAVILP QLVAPVIVFV
LKRFFDAVPR ELDEAARMDG ASYWRLFTTV IMPLSRPVLA AASIFVFITA WNNYLWPFII
TTDPALMTLP VGIPNILDSY GTFYASQLAA SMVAAAPMVV VFMLFQRQIV NSVATTGLGG
Q