Gene Ndas_0965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0965 
Symbol 
ID9244810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1182940 
End bp1185039 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content70% 
IMG OID 
Productexcinuclease ABC, B subunit 
Protein accessionYP_003678915 
Protein GI297559941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACCGG TCAGCGACAT CAAACGCAGC GAGGCGCCCT TCGAGGTGAT CTCGGAGATG 
ACCCCGGCGG GGGACCAGCC GGGCGCGATC GCCGAGATCA GCAGGAGGGT GCGGGACGGG
GAGCCGCACA CGGTGCTGCT CGGCGCGACC GGCACCGGCA AGACGGCGAC CGTGGCGTGG
ACGGTGGAGC AGCTCCAGCG GCCCACCCTG GTGATGCAGC CCAACAAGAC CCTGGCGGCG
CAGTTCGCCA ACGAGCTGCG CCAGATGCTG CCCAACAACG CCGTCGAGTA CTTCGTGTCG
TACTACGACT ACTACCAGCC CGAGGCCTAC GTCCCGCAGA GCGACACCTT CATCGAGAAG
GACTCCTCCA TCAACGACGA GGTCGAGCGG CTGCGCCACT CGGCCACCAA CTCGCTGCTC
ACGCGCCGGG ACACGATCGT GGTCGCCTCG GTCTCGTGCA TCTACGGTCT GGGCACCCCG
CAGGAGTACG TGGACCGGAT GGCGCAGCTG GCGGTGGGCA TGGAGGTCGA CCGCGACGAC
CTGCTGCGCC GCCTGGTGGA GATGCAGTAC TCCCGCAACG ACACCGCGTT CACGCGAGGC
ACGTTCCGGG TGCGGGGCGA CACCATCGAG ATCATCCCGG TCTACGAGGA GCTGGCGATC
CGCATCGAGA TGTTCGGTGA CGAGGTCGAG CGCCTGCTGA CCCTGCACCC GCTCACCGGC
GAGGTGCTGG GCGAGAGCCG GGAGATGTTC ATCTTCCCCG CCTCGCACTA CGTGGCCGGC
GAGGAGCGCA CCGAGCGGGC GATCGCCACC ATCGAGGCGG AACTGGGCGA GCGGCTGGCC
GAGCTGGAGG CCCAGGGCAA GCTGCTGGAG GCGCAGCGCC TGCGCATGCG CACCACCCAC
GACCTGGAGA TGATGCGCCA GCTGGGCACC TGCTCGGGCA TCGAGAACTA CTCCCGGCAC
TTCGACGGCC GTGAGCCGGG CAGCCCGCCC AACACGCTCC TGGACTACTT CCCCGAGGAC
TTCCTGCTGG TGCTGGACGA GTCCCACGTG ACCGTCCCGC AGATCGGCGC GATGTACGAG
GGCGACGCCG CGCGCAAGCG CACCCTGGTC GAGCACGGGT TCCGGCTCCC CTCGGCGCTG
GACAACCGGC CGCTGAAGTG GGAGGAGTTC ACCGAGCGCA TCGGGCAGAG CGTCTACCTG
TCGGCGACGC CGGGCCGTTA CGAGCTGCGC CAGGGCGGCG GGGAGGTGGT CGAGCAGGTC
ATCCGTCCCA CCGGGCTGGT GGACCCCGAG GTGCTGGTCA AGCCGACCGA CGGGCAGATC
GACGACCTGG TCCACGAGAT CCGGGTGCGC GCCGAGCGCG ACGAGCGGGT ACTGGTCACC
ACGCTCACCA AGAAGATGTC CGAGGACCTC ACCGACTACT TCACCGAACT CGGCATCCGG
GTGCGCTACC TGCACAGCGA GGTGGACACG CTGCGCCGCG TGGAGCTGCT GCGCGAGCTG
CGGGTGGGCG AGTTCGACGT GCTGGTGGGC ATCAACCTGC TGCGCGAGGG CCTGGACCTG
CCCGAGGTGT CGTTGGTGGC GATCCTGGAC GCGGACAAGG AGGGCTTCCT GCGCTCGGAG
ACCTCGCTGA TCCAGACGAT CGGGCGCGCG GCGCGCAACG TCGCGGGCCA GGTGCACATG
TACGCCGACA ACGTCACCGA CTCCATGCGG GCGGCCATCG ACGAGACCAA CCGGCGCCGG
GACAAGCAGC TGGCCTACAA CGCCGAGCAC GGGATCGACC CCACGCCGCT GCGCAAGCAG
ATCGCCGACA TCCTGGACAC GCTCAACCGC GAGGACGTGG ACACCGAGGA GCTCATGGCC
ACCGGGTACC GCAGTTCGGG GGGCAGGGGC GGCCGGGCGC CGGTGCCCGC GCTGGGCGAG
CGTTCGGCGG ACGTGTCCGC CATGCCGCGC GCGGAGCTGG CCGGGCTCAT CGAGCAGCTG
AGCGAGCAGA TGCACCAGGC GGCCACCGAC CTCCAGTTCG AGCTGGCGGC CCGGTTGCGC
GACGAGATCG GCGAACTCAA ACGTGAGCTC CGCGGCATGG ACGCGGCCGG GGTGAAGTGA
 
Protein sequence
MRPVSDIKRS EAPFEVISEM TPAGDQPGAI AEISRRVRDG EPHTVLLGAT GTGKTATVAW 
TVEQLQRPTL VMQPNKTLAA QFANELRQML PNNAVEYFVS YYDYYQPEAY VPQSDTFIEK
DSSINDEVER LRHSATNSLL TRRDTIVVAS VSCIYGLGTP QEYVDRMAQL AVGMEVDRDD
LLRRLVEMQY SRNDTAFTRG TFRVRGDTIE IIPVYEELAI RIEMFGDEVE RLLTLHPLTG
EVLGESREMF IFPASHYVAG EERTERAIAT IEAELGERLA ELEAQGKLLE AQRLRMRTTH
DLEMMRQLGT CSGIENYSRH FDGREPGSPP NTLLDYFPED FLLVLDESHV TVPQIGAMYE
GDAARKRTLV EHGFRLPSAL DNRPLKWEEF TERIGQSVYL SATPGRYELR QGGGEVVEQV
IRPTGLVDPE VLVKPTDGQI DDLVHEIRVR AERDERVLVT TLTKKMSEDL TDYFTELGIR
VRYLHSEVDT LRRVELLREL RVGEFDVLVG INLLREGLDL PEVSLVAILD ADKEGFLRSE
TSLIQTIGRA ARNVAGQVHM YADNVTDSMR AAIDETNRRR DKQLAYNAEH GIDPTPLRKQ
IADILDTLNR EDVDTEELMA TGYRSSGGRG GRAPVPALGE RSADVSAMPR AELAGLIEQL
SEQMHQAATD LQFELAARLR DEIGELKREL RGMDAAGVK