| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0930 |
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| Symbol | |
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| ID | 9244775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 1140807 |
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| End bp | 1142651 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003678880 |
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| Protein GI | 297559906 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0349089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA TCCGACCCGG CGCCGCCGCC GGGGCGGTCC TGATGGGGAT CGGCCTGCTG
GCCGCCCCCG CGCAGGCCGC CCCCGTCCCG GCGGCCCCGA CCCCGACGAC ACCGGTCCCG
GCAGCCCCCG CCCCCGCCGA GGACGTCCGG GCCGCCGACA ACGGCGAGAC CATCGTCCAG
CTCTTCCAGT GGAACTGGGA CTCCGTCGCC ACCGAGTGCG AGGAGTTCCT CGGCCCCCAC
GGCTTCGGCG GGGTGCAGGT CTCCCCGCCC CAGGAGCACG TGGTCATCCC CTTCGCCGAG
GGCGGCGACT ACCCCTGGTG GCAGGACTAC CAGCCGACCT CCTACCGCAT CGACAACACC
CGGCGCGGCA CCGCCGAGGA GTTCCAGGCG ATGGTCTCCA CCTGTGCCGA CAACGGCGTG
AGGATCTACG CCGACGCGAT CATCAACCAC ATGACCGGCG ACGGCTCGGG CACCGGCAGC
GCGGGCACGG AGTGGGCCAA GTACGAGTAC CCCGACCTGT TCGGCGACGG CACCGCCTCC
CGCACGGGGG AGGACTTCAG CTCCTGCCGG AGGGAGATCA GCAACTGGAA CGACAAGTGG
GAGGTGCAGA ACTGCGAGCT GGTCGGCCTG TCCGACCTCG ACACGGGTGA CCCCGAGGTG
CGCGCGCAGA TCCGCCGCTA CCTCAACGGC CTGGTGGACA TGGGCGTGGG GGGCTTCCGC
GTGGACGCCT CCAAGCACGT CCCCGAGGCC CACGTCGACG CGATCTTCTC CGACCTGAAC
GAGGTCCCGG TCTTCGGCGG TCAGCCCGAC GTCTTCCACG AGGTCTACGG GGACCAGACC
ATCCCCTACA CCGCCTACAC GCCCTACGGC CGTGTGACCG CCTTCGACTA CCAGCGCGAC
ATCTCCAACA AGTTCGCCGG AGGCGACATC TCCGGCCTGG CCCAGCTGCC GGACTACGGC
GGGCTCACCG ACGAGCAGGC CACCGTCTTC GTCGACAACC ACGACACCCA GCGCTACCAC
CCGACCCTGA CCTTCAAGGA CGGCGACCGC TACCACCTGG CCGTGGCGTT CATGCTGGCC
CACCCCTACG GGCGCCCCGT GGTGATGTCC AGCTACGACT TCGGCTCCAA CGTCACCCAG
GGCCCGCCCA GCGTCGGCGA GGCGGCGGGC AACCCGGCGG GCTGGATCAC CGCCGACACC
GACTGCGCCA GCGCCGAGTG GGTCTGCGAG CACCGCCACC CGACCGTCGC CGGGATGGCC
GCCTTCCGCA ACGCCACCGG CGACACCCCC GTCGTCCAGC GCGCCACCGA CGGCTCCTCC
CGGCTCGCCT TCGACCGGGG CGACCGCGGC TTCGCCGCCT TCAACGCGAC CGGCGGCACC
TGGAACCTGA CCGCCGACAC CGGCCTGCCC GACGGCAGCT ACGACAACGC CGCCGGGAGC
GGGACCCTCA CCGTCGCCGA CGGCCGGATC AGCGCCCGGG TCCCCGCGAA CGGGGCCGTC
GCCCTGCACG TGGGCGGCAC CTGCGACGAC CCGGCCGAGT GCGGGGGCGG CGGCCCCGGT
GAGCCGGGCG AGCCGGGCGA GGTCAACGTC TCCGCCACCG TGGAGACCTG GTACGGCCAG
GAGGTGTACG TGGTCGGCTC CACCCCCGGG CTGGGGTCCT GGAACCCCCC GAGCGGGGTG
AAGCTGTCCA CCGACGCGTC CACCTACCCC GTGTGGTCGG GCACCGCCCC CATCGGTGCC
GACACCGAGT GGAAGCTGGT CAAGATCGAC GGCGCGGGCA ACGTCGAGTG GGAGTCCGGC
GCCAACCGCG TCGGCCCCGC CGCCAGCGTC ACCTGGCGCG ACTGA
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| Protein sequence | MKPIRPGAAA GAVLMGIGLL AAPAQAAPVP AAPTPTTPVP AAPAPAEDVR AADNGETIVQ
LFQWNWDSVA TECEEFLGPH GFGGVQVSPP QEHVVIPFAE GGDYPWWQDY QPTSYRIDNT
RRGTAEEFQA MVSTCADNGV RIYADAIINH MTGDGSGTGS AGTEWAKYEY PDLFGDGTAS
RTGEDFSSCR REISNWNDKW EVQNCELVGL SDLDTGDPEV RAQIRRYLNG LVDMGVGGFR
VDASKHVPEA HVDAIFSDLN EVPVFGGQPD VFHEVYGDQT IPYTAYTPYG RVTAFDYQRD
ISNKFAGGDI SGLAQLPDYG GLTDEQATVF VDNHDTQRYH PTLTFKDGDR YHLAVAFMLA
HPYGRPVVMS SYDFGSNVTQ GPPSVGEAAG NPAGWITADT DCASAEWVCE HRHPTVAGMA
AFRNATGDTP VVQRATDGSS RLAFDRGDRG FAAFNATGGT WNLTADTGLP DGSYDNAAGS
GTLTVADGRI SARVPANGAV ALHVGGTCDD PAECGGGGPG EPGEPGEVNV SATVETWYGQ
EVYVVGSTPG LGSWNPPSGV KLSTDASTYP VWSGTAPIGA DTEWKLVKID GAGNVEWESG
ANRVGPAASV TWRD
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