Gene Ndas_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0912 
Symbol 
ID9244757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1117075 
End bp1118001 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content73% 
IMG OID 
Productpseudouridine synthase, RluA family 
Protein accessionYP_003678862 
Protein GI297559888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG TTCGAAGCCT GCCCGTGCCC GACGGGCTGG AGGGCGACCG GCTCGACTCG 
GCCATCGCCC GGATGTTCGG CCTGTCCCGT ACCCGCGCCG CCGAGATCAT CGGTGACGGC
GGCGTCCTGG TCGACGGCTC CGAGGCGGCC AAGTCCGACC GCGTCAGCGC GGGGGCCTGG
CTGGAGGTCA CCCTCCCGCC GCCGCCCACC GCTCCCGTGC CGCGTCCCGA GGCCGTGCCG
GGCATGCGGA TCGTGCACGA GGACACCGAC ATCATCGTGG TGGACAAGCC GGTCGGCGTG
GTCGCCCACC CGACCGTGGG CTGGACCGGT CCCAGCGTCC TGGAGGGCCT TCTGGCCTCC
GGAGTGCAGG TGGCCACCAG CGGCGCCGCC GAGCGCCAGG GCATCGTGCA CCGGCTGGAC
GCCAACACCA CCGGCCTGAT GGTGGTCGCC AAGAGCGAGA CCGCCTACAG CGTGCTCAAG
CGGGCGTTCA AGGAGCGCAC CGTGGACAAG CACTACCACA CGCTCGTCCA GGGGCACCCG
GATCCACTCC GGGGCACCGT GGACGCGCCG ATCGACCGCC ACCCGGCGGG CGACGGACGC
TGGGCCGTGG TCGCGGGCGG GCGCCCGTCG GTGACGCACT ACGACACGCA GGAGGCCTTC
CGGGCCGCGA GCCTGCTGGA GATCAAGCTG GAGACGGGCC GCACCCACCA GATCCGGGTG
CACATGTCGG CCCTGCGCCA CCCGTGCGTG GGCGACATGC TCTACGGCGC CGACCCGACC
CTGGCCGAGC GGCTGGGCGT GCGCCGCCAG TGGCTGCACG CGGTGCGCCT GGGCTTCGAC
CACCCCACCG AGCACCGCCC GGTGGAGTTC TCCAGTCCCT ACCCGGACGA CCTCGCCGCC
GCCGTCGAAA CGCTGCGCGA GGACTGA
 
Protein sequence
MSDVRSLPVP DGLEGDRLDS AIARMFGLSR TRAAEIIGDG GVLVDGSEAA KSDRVSAGAW 
LEVTLPPPPT APVPRPEAVP GMRIVHEDTD IIVVDKPVGV VAHPTVGWTG PSVLEGLLAS
GVQVATSGAA ERQGIVHRLD ANTTGLMVVA KSETAYSVLK RAFKERTVDK HYHTLVQGHP
DPLRGTVDAP IDRHPAGDGR WAVVAGGRPS VTHYDTQEAF RAASLLEIKL ETGRTHQIRV
HMSALRHPCV GDMLYGADPT LAERLGVRRQ WLHAVRLGFD HPTEHRPVEF SSPYPDDLAA
AVETLRED