Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0912 |
Symbol | |
ID | 9244757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1117075 |
End bp | 1118001 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003678862 |
Protein GI | 297559888 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACG TTCGAAGCCT GCCCGTGCCC GACGGGCTGG AGGGCGACCG GCTCGACTCG GCCATCGCCC GGATGTTCGG CCTGTCCCGT ACCCGCGCCG CCGAGATCAT CGGTGACGGC GGCGTCCTGG TCGACGGCTC CGAGGCGGCC AAGTCCGACC GCGTCAGCGC GGGGGCCTGG CTGGAGGTCA CCCTCCCGCC GCCGCCCACC GCTCCCGTGC CGCGTCCCGA GGCCGTGCCG GGCATGCGGA TCGTGCACGA GGACACCGAC ATCATCGTGG TGGACAAGCC GGTCGGCGTG GTCGCCCACC CGACCGTGGG CTGGACCGGT CCCAGCGTCC TGGAGGGCCT TCTGGCCTCC GGAGTGCAGG TGGCCACCAG CGGCGCCGCC GAGCGCCAGG GCATCGTGCA CCGGCTGGAC GCCAACACCA CCGGCCTGAT GGTGGTCGCC AAGAGCGAGA CCGCCTACAG CGTGCTCAAG CGGGCGTTCA AGGAGCGCAC CGTGGACAAG CACTACCACA CGCTCGTCCA GGGGCACCCG GATCCACTCC GGGGCACCGT GGACGCGCCG ATCGACCGCC ACCCGGCGGG CGACGGACGC TGGGCCGTGG TCGCGGGCGG GCGCCCGTCG GTGACGCACT ACGACACGCA GGAGGCCTTC CGGGCCGCGA GCCTGCTGGA GATCAAGCTG GAGACGGGCC GCACCCACCA GATCCGGGTG CACATGTCGG CCCTGCGCCA CCCGTGCGTG GGCGACATGC TCTACGGCGC CGACCCGACC CTGGCCGAGC GGCTGGGCGT GCGCCGCCAG TGGCTGCACG CGGTGCGCCT GGGCTTCGAC CACCCCACCG AGCACCGCCC GGTGGAGTTC TCCAGTCCCT ACCCGGACGA CCTCGCCGCC GCCGTCGAAA CGCTGCGCGA GGACTGA
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Protein sequence | MSDVRSLPVP DGLEGDRLDS AIARMFGLSR TRAAEIIGDG GVLVDGSEAA KSDRVSAGAW LEVTLPPPPT APVPRPEAVP GMRIVHEDTD IIVVDKPVGV VAHPTVGWTG PSVLEGLLAS GVQVATSGAA ERQGIVHRLD ANTTGLMVVA KSETAYSVLK RAFKERTVDK HYHTLVQGHP DPLRGTVDAP IDRHPAGDGR WAVVAGGRPS VTHYDTQEAF RAASLLEIKL ETGRTHQIRV HMSALRHPCV GDMLYGADPT LAERLGVRRQ WLHAVRLGFD HPTEHRPVEF SSPYPDDLAA AVETLRED
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