Gene Ndas_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0663 
Symbol 
ID9244505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp811690 
End bp812577 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content73% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003678614 
Protein GI297559640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.350671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.926777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA GCGACTTCCT GGCCGAGCGG TTCGAGGAGC ACCGCGTCCA CCTCCGGGCG 
GTGGCCTACC GCATGCTCGG CTCCCTGGCC GAGGCCGACG ACGCCGTCCA GGAGGCCTGG
CTGCGGCTCG CCCGCTCCGA CACCGACGGG ATCGGCAACC TCGGCGGCTG GCTGACCACG
GTCGTCGGCC GGGTCTGCCT GGATATGCTG CGCTCGCGCA CGCAACGCGG CGAGACCCCC
TTGGAGGCCC GTCTGCCGGA CCCGATCGTG AGCGAACCGG CCACCGACCC CGAGCACGTG
GCGCTGATGG CCGACTCGGT CGGGTTGGCC CTGCTGGTGG TCCTGGAATC GCTCAACCCG
GCCGAACGGC TGGCCTTCGT CCTGCACGAC ATGTTCGGCC TGCCGTTCGA GGAGATCGCC
CCGATCGTCG ACCGCACCCC GGCCGCGGCC CGCAAACTCG CCAGCCGCGC CCGCGTCCGC
GTCCGGGGGG CCGCCCCCGA ACCCGACCCC GATCCGGTCG CCCAGCGCCG CGTCGTGGAC
GCCTTCCTCC GAGCCGCACG CGGCGGCGAC TTCGACGCCC TGGTGGCCGT TCTCGATCCC
GACGTCGTGC TGCGCATCGA CGGCGGGAAC GCGCTGCCCG GCGGTATGAG GGTCCTGCGG
GGCCGGGAGG CGGTGGCCGG TCAGGCCGCC ACCTTCCACC GCATGGCCAC CCTCTCGACC
AGCCGTCCCG CACTGGTCAA CGGAAGGGCC GGTCTGGTCA ACACCGTCGA CGGCGCGCTC
TTCTCGGTCA TGGGGTTCAC CGTCACGGAC GGGAGGATCA CCGCGATCGA GATCCTGTCC
GACCCCGAAC GCCTCGACGC CGTCGACCTC GCGGATCAGG GGAGCTGA
 
Protein sequence
MDESDFLAER FEEHRVHLRA VAYRMLGSLA EADDAVQEAW LRLARSDTDG IGNLGGWLTT 
VVGRVCLDML RSRTQRGETP LEARLPDPIV SEPATDPEHV ALMADSVGLA LLVVLESLNP
AERLAFVLHD MFGLPFEEIA PIVDRTPAAA RKLASRARVR VRGAAPEPDP DPVAQRRVVD
AFLRAARGGD FDALVAVLDP DVVLRIDGGN ALPGGMRVLR GREAVAGQAA TFHRMATLST
SRPALVNGRA GLVNTVDGAL FSVMGFTVTD GRITAIEILS DPERLDAVDL ADQGS