Gene Ndas_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0561 
Symbol 
ID9244402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp693117 
End bp693845 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003678514 
Protein GI297559540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.818378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTGT CAGCGGCGCG GCTGTGGCAC GATGAAGACG TGAACCGACA GGCCAACTTC 
ACCCTCGCCC CCTCGTCCCT GACCGACGCG CTCTACCAGT CGCTGCGCGC TCGCATCGTC
AACGGGGAGA TCGCGGCTGG CGAGAAGCTC ACCGAGCACC GGATCGCCAG CGAGTACGAC
GTCGCGCGCC CCACCGCCAA GGCGTGTCTG GAGCGGCTCA CCGCCCTCGG CCTCCTGCGC
CGGTCGGCCC ACAAGACGGC GGTCGTCCCC GACTTCCACG CCGACGAGAT CCGCGACCTC
TTCTTCAGCC GGGGCACGGT GGAGAGCGCG GCGGTCACCG TCCTGGCGGC CGAGGGGGCG
GTCCCCAGGG AGGCCACGGA GGCGCAGGCG CTGATCGAGG CGGCGGCCAG GGACGGCGAC
TTCGAGCGCC AGGTGGAGGC CGACATCGCC TTCCACACCG CGCTGGTCTC CGGTGCGGGC
AGCGAGCGCC TGAGCAGGAT GCACGAGCTG ATCATGGGCG AGGTGCACCT GACCATGGGC
CGCTTCCAGG CGCACCGGTC CACGCAGGGC AGCACCGTGG CCCACGAGCA CGCGACGATC
CTGGAGGGCA TCAGGGCGCA GGACCCCGAG GCGGCGCGCC TGAGGCTGGC CGAGCACCTC
GACCACGCGC GCGGCCGCCT CCTGGCACTG CTGGACGCGG GGACCCAGGA GGCGGCTGGA
GCCGAGTAG
 
Protein sequence
MYVSAARLWH DEDVNRQANF TLAPSSLTDA LYQSLRARIV NGEIAAGEKL TEHRIASEYD 
VARPTAKACL ERLTALGLLR RSAHKTAVVP DFHADEIRDL FFSRGTVESA AVTVLAAEGA
VPREATEAQA LIEAAARDGD FERQVEADIA FHTALVSGAG SERLSRMHEL IMGEVHLTMG
RFQAHRSTQG STVAHEHATI LEGIRAQDPE AARLRLAEHL DHARGRLLAL LDAGTQEAAG
AE