Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0561 |
Symbol | |
ID | 9244402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 693117 |
End bp | 693845 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003678514 |
Protein GI | 297559540 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.818378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGTGT CAGCGGCGCG GCTGTGGCAC GATGAAGACG TGAACCGACA GGCCAACTTC ACCCTCGCCC CCTCGTCCCT GACCGACGCG CTCTACCAGT CGCTGCGCGC TCGCATCGTC AACGGGGAGA TCGCGGCTGG CGAGAAGCTC ACCGAGCACC GGATCGCCAG CGAGTACGAC GTCGCGCGCC CCACCGCCAA GGCGTGTCTG GAGCGGCTCA CCGCCCTCGG CCTCCTGCGC CGGTCGGCCC ACAAGACGGC GGTCGTCCCC GACTTCCACG CCGACGAGAT CCGCGACCTC TTCTTCAGCC GGGGCACGGT GGAGAGCGCG GCGGTCACCG TCCTGGCGGC CGAGGGGGCG GTCCCCAGGG AGGCCACGGA GGCGCAGGCG CTGATCGAGG CGGCGGCCAG GGACGGCGAC TTCGAGCGCC AGGTGGAGGC CGACATCGCC TTCCACACCG CGCTGGTCTC CGGTGCGGGC AGCGAGCGCC TGAGCAGGAT GCACGAGCTG ATCATGGGCG AGGTGCACCT GACCATGGGC CGCTTCCAGG CGCACCGGTC CACGCAGGGC AGCACCGTGG CCCACGAGCA CGCGACGATC CTGGAGGGCA TCAGGGCGCA GGACCCCGAG GCGGCGCGCC TGAGGCTGGC CGAGCACCTC GACCACGCGC GCGGCCGCCT CCTGGCACTG CTGGACGCGG GGACCCAGGA GGCGGCTGGA GCCGAGTAG
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Protein sequence | MYVSAARLWH DEDVNRQANF TLAPSSLTDA LYQSLRARIV NGEIAAGEKL TEHRIASEYD VARPTAKACL ERLTALGLLR RSAHKTAVVP DFHADEIRDL FFSRGTVESA AVTVLAAEGA VPREATEAQA LIEAAARDGD FERQVEADIA FHTALVSGAG SERLSRMHEL IMGEVHLTMG RFQAHRSTQG STVAHEHATI LEGIRAQDPE AARLRLAEHL DHARGRLLAL LDAGTQEAAG AE
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